Analysis of interatomic Contacts of Structural Units in PDB entry:
8C6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8C6O entry

There are 2 chains in PDB entry 8C6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 195
B
 SER 2PRO 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8C6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 30Right-handed alpha
Helix 2
AA2
A
39 47Right-handed alpha
Helix 3
AA3
A
49 55Right-handed alpha
Helix 4
AA4
A
57 74Right-handed alpha
Helix 5
AA5
A
85 105Right-handed alpha
Helix 6
AA6
A
109 123Right-handed alpha
Helix 7
AA7
A
131 142Right-handed alpha
Helix 8
AA8
A
147 158Right-handed alpha
Helix 9
AA9
A
168 180Right-handed alpha
Helix 10
AB1
A
183 187Right-handed 310
Helix 11
AB2
B
15 30Right-handed alpha
Helix 12
AB3
B
38 48Right-handed alpha
Helix 13
AB4
B
49 54Right-handed alpha
Helix 14
AB5
B
57 74Right-handed alpha
Helix 15
AB6
B
85 105Right-handed alpha
Helix 16
AB7
B
109 122Right-handed alpha
Helix 17
AB8
B
131 143Right-handed alpha
Helix 18
AB9
B
147 158Right-handed alpha
Helix 19
AC1
B
168 180Right-handed alpha
Helix 20
AC2
B
183 187Right-handed 310
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There are 5 sheets in PDB entry 8C6O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
B
4 8anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
82 84anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
166 167anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 37first strand
Strand 2
B
83 84anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 130first strand
Strand 2
B
166 167anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il