Analysis of interatomic Contacts of Structural Units in PDB entry:
8C6Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8C6Z entry

There is 1 chain in PDB entry 8C6Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 25THR 597
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8C6Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 42Right-handed 310
Helix 2
AA2
A
45 49Right-handed 310
Helix 3
AA3
A
50 54Right-handed 310
Helix 4
AA4
A
74 80Right-handed alpha
Helix 5
AA5
A
96 108Right-handed alpha
Helix 6
AA6
A
125 132Right-handed alpha
Helix 7
AA7
A
132 150Right-handed alpha
Helix 8
AA8
A
185 209Right-handed alpha
Helix 9
AA9
A
221 229Right-handed alpha
Helix 10
AB1
A
230 238Right-handed alpha
Helix 11
AB2
A
269 273Right-handed 310
Helix 12
AB3
A
276 287Right-handed alpha
Helix 13
AB4
A
290 292Right-handed 310
Helix 14
AB5
A
358 360Right-handed 310
Helix 15
AB6
A
361 369Right-handed alpha
Helix 16
AB7
A
398 412Right-handed alpha
Helix 17
AB8
A
421 425Right-handed 310
Helix 18
AB9
A
434 446Right-handed alpha
Helix 19
AC1
A
493 504Right-handed alpha
Helix 20
AC2
A
542 544Right-handed 310
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There are 7 sheets in PDB entry 8C6Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
56 64anti-parallel
Strand 3
A
112 119parallel
Strand 4
A
154 159parallel
Strand 5
A
213 218parallel
Strand 6
A
240 243parallel
Strand 7
A
294 299parallel
Strand 8
A
416 420parallel
Strand 9
A
27 33parallel
Strand 10
A
56 64parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 305first strand
Strand 2
A
393 395anti-parallel
Strand 3
A
382 386anti-parallel
Strand 4
A
373 377anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 309first strand
Strand 2
A
323 324anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 329first strand
Strand 2
A
335 336anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 469first strand
Strand 2
A
477 485anti-parallel
Strand 3
A
555 562anti-parallel
Strand 4
A
520 523anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 507first strand
Strand 2
A
549 550anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 533first strand
Strand 2
A
536 540anti-parallel
Strand 3
A
510 515anti-parallel
Strand 4
A
572 579anti-parallel
Strand 5
A
588 595anti-parallel
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