Analysis of interatomic Contacts of Structural Units in PDB entry:
8C8O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8C8O entry

There are 6 chains in PDB entry 8C8O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 446TRP 1498
B
 THR 446TRP 1498
C
 THR 446TRP 1498
D
 THR 446TRP 1498
E
 THR 446TRP 1498
F
 THR 446TRP 1498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are144 helices in PDB entry 8C8O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
481 484Right-handed 310
Helix 2
AA2
A
533 538Right-handed alpha
Helix 3
AA3
A
543 547Right-handed alpha
Helix 4
AA4
A
560 564Right-handed 310
Helix 5
AA5
A
605 610Right-handed alpha
Helix 6
AA6
A
630 633Right-handed 310
Helix 7
AA7
A
681 689Right-handed alpha
Helix 8
AA8
A
694 697Right-handed 310
Helix 9
AA9
A
733 735Right-handed 310
Helix 10
AB1
A
769 772Right-handed 310
Helix 11
AB2
A
773 779Right-handed alpha
Helix 12
AB3
A
796 800Right-handed 310
Helix 13
AB4
A
850 853Right-handed 310
Helix 14
AB5
A
919 928Right-handed alpha
Helix 15
AB6
A
933 938Right-handed alpha
Helix 16
AB7
A
1029 1033Right-handed 310
Helix 17
AB8
A
1050 1054Right-handed 310
Helix 18
AB9
A
1078 1081Right-handed 310
Helix 19
AC1
A
1164 1167Right-handed 310
Helix 20
AC2
A
1183 1188Right-handed alpha
Helix 21
AC3
A
1256 1259Right-handed 310
Helix 22
AC4
A
1269 1271Right-handed 310
Helix 23
AC5
A
1291 1297Right-handed alpha
Helix 24
AC6
A
1389 1392Right-handed 310
Helix 25
AC7
B
481 484Right-handed 310
Helix 26
AC8
B
533 538Right-handed alpha
Helix 27
AC9
B
543 547Right-handed alpha
Helix 28
AD1
B
560 564Right-handed 310
Helix 29
AD2
B
605 610Right-handed alpha
Helix 30
AD3
B
630 633Right-handed 310
Helix 31
AD4
B
681 689Right-handed alpha
Helix 32
AD5
B
694 697Right-handed 310
Helix 33
AD6
B
733 735Right-handed 310
Helix 34
AD7
B
769 772Right-handed 310
Helix 35
AD8
B
773 779Right-handed alpha
Helix 36
AD9
B
796 800Right-handed 310
Helix 37
AE1
B
850 853Right-handed 310
Helix 38
AE2
B
919 928Right-handed alpha
Helix 39
AE3
B
933 938Right-handed alpha
Helix 40
AE4
B
1029 1033Right-handed 310
Helix 41
AE5
B
1050 1054Right-handed 310
Helix 42
AE6
B
1078 1081Right-handed 310
Helix 43
AE7
B
1164 1167Right-handed 310
Helix 44
AE8
B
1183 1188Right-handed alpha
Helix 45
AE9
B
1256 1259Right-handed 310
Helix 46
AF1
B
1269 1271Right-handed 310
Helix 47
AF2
B
1291 1297Right-handed alpha
Helix 48
AF3
B
1389 1392Right-handed 310
Helix 49
AF4
C
481 484Right-handed 310
Helix 50
AF5
C
533 538Right-handed alpha
Helix 51
AF6
C
543 547Right-handed alpha
Helix 52
AF7
C
560 564Right-handed 310
Helix 53
AF8
C
605 610Right-handed alpha
Helix 54
AF9
C
630 633Right-handed 310
Helix 55
AG1
C
681 689Right-handed alpha
Helix 56
AG2
C
694 697Right-handed 310
Helix 57
AG3
C
733 735Right-handed 310
Helix 58
AG4
C
769 772Right-handed 310
Helix 59
AG5
C
773 779Right-handed alpha
Helix 60
AG6
C
796 800Right-handed 310
Helix 61
AG7
C
850 853Right-handed 310
Helix 62
AG8
C
919 928Right-handed alpha
Helix 63
AG9
C
933 938Right-handed alpha
Helix 64
AH1
C
1029 1033Right-handed 310
Helix 65
AH2
C
1050 1054Right-handed 310
Helix 66
AH3
C
1078 1081Right-handed 310
Helix 67
AH4
C
1164 1167Right-handed 310
Helix 68
AH5
C
1183 1188Right-handed alpha
Helix 69
AH6
C
1256 1259Right-handed 310
Helix 70
AH7
C
1269 1271Right-handed 310
Helix 71
AH8
C
1291 1297Right-handed alpha
Helix 72
AH9
C
1389 1392Right-handed 310
Helix 73
AI1
D
481 484Right-handed 310
Helix 74
AI2
D
533 538Right-handed alpha
Helix 75
AI3
D
543 547Right-handed alpha
Helix 76
AI4
D
560 564Right-handed 310
Helix 77
AI5
D
605 610Right-handed alpha
Helix 78
AI6
D
630 633Right-handed 310
Helix 79
AI7
D
681 689Right-handed alpha
Helix 80
AI8
D
694 697Right-handed 310
Helix 81
AI9
D
733 735Right-handed 310
Helix 82
AJ1
D
769 772Right-handed 310
Helix 83
AJ2
D
773 779Right-handed alpha
Helix 84
AJ3
D
796 800Right-handed 310
Helix 85
AJ4
D
850 853Right-handed 310
Helix 86
AJ5
D
919 928Right-handed alpha
Helix 87
AJ6
D
933 938Right-handed alpha
Helix 88
AJ7
D
1029 1033Right-handed 310
Helix 89
AJ8
D
1050 1054Right-handed 310
Helix 90
AJ9
D
1078 1081Right-handed 310
Helix 91
AK1
D
1164 1167Right-handed 310
Helix 92
AK2
D
1183 1188Right-handed alpha
Helix 93
AK3
D
1256 1259Right-handed 310
Helix 94
AK4
D
1269 1271Right-handed 310
Helix 95
AK5
D
1291 1297Right-handed alpha
Helix 96
AK6
D
1389 1392Right-handed 310
Helix 97
AK7
E
481 484Right-handed 310
Helix 98
AK8
E
533 538Right-handed alpha
Helix 99
AK9
E
543 547Right-handed alpha
Helix 100
AL1
E
560 564Right-handed 310
Helix 101
AL2
E
605 610Right-handed alpha
Helix 102
AL3
E
630 633Right-handed 310
Helix 103
AL4
E
681 689Right-handed alpha
Helix 104
AL5
E
694 697Right-handed 310
Helix 105
AL6
E
733 735Right-handed 310
Helix 106
AL7
E
769 772Right-handed 310
Helix 107
AL8
E
773 779Right-handed alpha
Helix 108
AL9
E
796 800Right-handed 310
Helix 109
AM1
E
850 853Right-handed 310
Helix 110
AM2
E
919 928Right-handed alpha
Helix 111
AM3
E
933 938Right-handed alpha
Helix 112
AM4
E
1029 1033Right-handed 310
Helix 113
AM5
E
1050 1054Right-handed 310
Helix 114
AM6
E
1078 1081Right-handed 310
Helix 115
AM7
E
1164 1167Right-handed 310
Helix 116
AM8
E
1183 1188Right-handed alpha
Helix 117
AM9
E
1256 1259Right-handed 310
Helix 118
AN1
E
1269 1271Right-handed 310
Helix 119
AN2
E
1291 1297Right-handed alpha
Helix 120
AN3
E
1389 1392Right-handed 310
Helix 121
AN4
F
481 484Right-handed 310
Helix 122
AN5
F
533 538Right-handed alpha
Helix 123
AN6
F
543 547Right-handed alpha
Helix 124
AN7
F
560 564Right-handed 310
Helix 125
AN8
F
605 610Right-handed alpha
Helix 126
AN9
F
630 633Right-handed 310
Helix 127
AO1
F
681 689Right-handed alpha
Helix 128
AO2
F
694 697Right-handed 310
Helix 129
AO3
F
733 735Right-handed 310
Helix 130
AO4
F
769 772Right-handed 310
Helix 131
AO5
F
773 779Right-handed alpha
Helix 132
AO6
F
796 800Right-handed 310
Helix 133
AO7
F
850 853Right-handed 310
Helix 134
AO8
F
919 928Right-handed alpha
Helix 135
AO9
F
933 938Right-handed alpha
Helix 136
AP1
F
1029 1033Right-handed 310
Helix 137
AP2
F
1050 1054Right-handed 310
Helix 138
AP3
F
1078 1081Right-handed 310
Helix 139
AP4
F
1164 1167Right-handed 310
Helix 140
AP5
F
1183 1188Right-handed alpha
Helix 141
AP6
F
1256 1259Right-handed 310
Helix 142
AP7
F
1269 1271Right-handed 310
Helix 143
AP8
F
1291 1297Right-handed alpha
Helix 144
AP9
F
1389 1392Right-handed 310
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