Analysis of interatomic Contacts of Structural Units in PDB entry:
8C9H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8C9H entry

There are 8 chains in PDB entry 8C9H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 26SER 278
B
 GLN 26SER 278
C
 GLN 26SER 278
D
 GLN 26SER 278
E
 GLN 26SER 278
F
 GLN 26SER 278
G
 GLN 26SER 278
H
 GLN 26SER 278
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are112 helices in PDB entry 8C9H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 30Right-handed 310
Helix 2
AA2
A
31 61Right-handed alpha
Helix 3
AA3
A
66 85Right-handed alpha
Helix 4
AA4
A
85 90Right-handed alpha
Helix 5
AA5
A
94 104Right-handed alpha
Helix 6
AA6
A
108 110Right-handed 310
Helix 7
AA7
A
111 134Right-handed alpha
Helix 8
AA8
A
134 143Right-handed alpha
Helix 9
AA9
A
154 158Right-handed 310
Helix 10
AB1
A
167 191Right-handed alpha
Helix 11
AB2
A
201 217Right-handed alpha
Helix 12
AB3
A
226 241Right-handed alpha
Helix 13
AB4
A
244 253Right-handed alpha
Helix 14
AB5
A
255 276Right-handed alpha
Helix 15
AB6
B
27 30Right-handed 310
Helix 16
AB7
B
31 61Right-handed alpha
Helix 17
AB8
B
66 85Right-handed alpha
Helix 18
AB9
B
85 90Right-handed alpha
Helix 19
AC1
B
94 104Right-handed alpha
Helix 20
AC2
B
108 110Right-handed 310
Helix 21
AC3
B
111 134Right-handed alpha
Helix 22
AC4
B
134 143Right-handed alpha
Helix 23
AC5
B
154 158Right-handed 310
Helix 24
AC6
B
167 191Right-handed alpha
Helix 25
AC7
B
201 217Right-handed alpha
Helix 26
AC8
B
226 241Right-handed alpha
Helix 27
AC9
B
244 253Right-handed alpha
Helix 28
AD1
B
255 276Right-handed alpha
Helix 29
AD2
C
27 30Right-handed 310
Helix 30
AD3
C
31 61Right-handed alpha
Helix 31
AD4
C
66 85Right-handed alpha
Helix 32
AD5
C
85 90Right-handed alpha
Helix 33
AD6
C
94 104Right-handed alpha
Helix 34
AD7
C
108 110Right-handed 310
Helix 35
AD8
C
111 134Right-handed alpha
Helix 36
AD9
C
134 143Right-handed alpha
Helix 37
AE1
C
154 158Right-handed 310
Helix 38
AE2
C
167 191Right-handed alpha
Helix 39
AE3
C
201 217Right-handed alpha
Helix 40
AE4
C
226 241Right-handed alpha
Helix 41
AE5
C
244 253Right-handed alpha
Helix 42
AE6
C
255 276Right-handed alpha
Helix 43
AE7
D
27 30Right-handed 310
Helix 44
AE8
D
31 61Right-handed alpha
Helix 45
AE9
D
66 85Right-handed alpha
Helix 46
AF1
D
85 90Right-handed alpha
Helix 47
AF2
D
94 104Right-handed alpha
Helix 48
AF3
D
108 110Right-handed 310
Helix 49
AF4
D
111 134Right-handed alpha
Helix 50
AF5
D
134 143Right-handed alpha
Helix 51
AF6
D
154 158Right-handed 310
Helix 52
AF7
D
167 189Right-handed alpha
Helix 53
AF8
D
201 217Right-handed alpha
Helix 54
AF9
D
226 241Right-handed alpha
Helix 55
AG1
D
244 253Right-handed alpha
Helix 56
AG2
D
255 276Right-handed alpha
Helix 57
AG3
E
27 30Right-handed 310
Helix 58
AG4
E
31 61Right-handed alpha
Helix 59
AG5
E
66 85Right-handed alpha
Helix 60
AG6
E
85 90Right-handed alpha
Helix 61
AG7
E
94 104Right-handed alpha
Helix 62
AG8
E
108 110Right-handed 310
Helix 63
AG9
E
111 134Right-handed alpha
Helix 64
AH1
E
134 143Right-handed alpha
Helix 65
AH2
E
154 158Right-handed 310
Helix 66
AH3
E
167 191Right-handed alpha
Helix 67
AH4
E
201 217Right-handed alpha
Helix 68
AH5
E
226 241Right-handed alpha
Helix 69
AH6
E
244 253Right-handed alpha
Helix 70
AH7
E
255 276Right-handed alpha
Helix 71
AH8
F
27 30Right-handed 310
Helix 72
AH9
F
31 61Right-handed alpha
Helix 73
AI1
F
66 85Right-handed alpha
Helix 74
AI2
F
85 90Right-handed alpha
Helix 75
AI3
F
94 104Right-handed alpha
Helix 76
AI4
F
108 110Right-handed 310
Helix 77
AI5
F
111 134Right-handed alpha
Helix 78
AI6
F
134 143Right-handed alpha
Helix 79
AI7
F
154 158Right-handed 310
Helix 80
AI8
F
167 191Right-handed alpha
Helix 81
AI9
F
201 217Right-handed alpha
Helix 82
AJ1
F
226 241Right-handed alpha
Helix 83
AJ2
F
244 253Right-handed alpha
Helix 84
AJ3
F
255 276Right-handed alpha
Helix 85
AJ4
G
27 30Right-handed 310
Helix 86
AJ5
G
31 61Right-handed alpha
Helix 87
AJ6
G
66 85Right-handed alpha
Helix 88
AJ7
G
85 90Right-handed alpha
Helix 89
AJ8
G
94 104Right-handed alpha
Helix 90
AJ9
G
108 110Right-handed 310
Helix 91
AK1
G
111 134Right-handed alpha
Helix 92
AK2
G
134 143Right-handed alpha
Helix 93
AK3
G
154 158Right-handed 310
Helix 94
AK4
G
167 191Right-handed alpha
Helix 95
AK5
G
201 217Right-handed alpha
Helix 96
AK6
G
226 241Right-handed alpha
Helix 97
AK7
G
244 253Right-handed alpha
Helix 98
AK8
G
255 276Right-handed alpha
Helix 99
AK9
H
27 30Right-handed 310
Helix 100
AL1
H
31 61Right-handed alpha
Helix 101
AL2
H
66 85Right-handed alpha
Helix 102
AL3
H
85 90Right-handed alpha
Helix 103
AL4
H
94 104Right-handed alpha
Helix 104
AL5
H
108 110Right-handed 310
Helix 105
AL6
H
111 134Right-handed alpha
Helix 106
AL7
H
134 143Right-handed alpha
Helix 107
AL8
H
154 158Right-handed 310
Helix 108
AL9
H
167 191Right-handed alpha
Helix 109
AM1
H
201 217Right-handed alpha
Helix 110
AM2
H
226 241Right-handed alpha
Helix 111
AM3
H
244 253Right-handed alpha
Helix 112
AM4
H
255 276Right-handed alpha
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There are no sheets in PDB entry 8C9H
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