Analysis of interatomic Contacts of Structural Units in PDB entry:
8CAN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8CAN entry

There are 6 chains in PDB entry 8CAN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 34	LYS 739
B	GLU 34	LYS 739
C	GLU 34	LYS 739
D	GLU 34	LYS 739
E	GLU 34	LYS 739
F	GLU 34	LYS 739

There are198 helices in PDB entry 8CAN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	40	52	Right-handed alpha
Helix 2	AA2	A	76	80	Right-handed 310
Helix 3	AA3	A	82	96	Right-handed alpha
Helix 4	AA4	A	108	124	Right-handed alpha
Helix 5	AA5	A	127	140	Right-handed alpha
Helix 6	AA6	A	143	158	Right-handed alpha
Helix 7	AA7	A	159	162	Right-handed 310
Helix 8	AA8	A	168	173	Right-handed alpha
Helix 9	AA9	A	174	177	Right-handed 310
Helix 10	AB1	A	179	193	Right-handed alpha
Helix 11	AB2	A	197	205	Right-handed alpha
Helix 12	AB3	A	227	231	Right-handed 310
Helix 13	AB4	A	232	237	Right-handed alpha
Helix 14	AB5	A	238	252	Right-handed alpha
Helix 15	AB6	A	261	266	Right-handed 310
Helix 16	AB7	A	267	290	Right-handed alpha
Helix 17	AB8	A	334	355	Right-handed alpha
Helix 18	AB9	A	369	371	Right-handed 310
Helix 19	AC1	A	372	382	Right-handed alpha
Helix 20	AC2	A	400	405	Right-handed 310
Helix 21	AC3	A	420	424	Right-handed 310
Helix 22	AC4	A	427	430	Right-handed 310
Helix 23	AC5	A	431	452	Right-handed alpha
Helix 24	AC6	A	456	461	Right-handed alpha
Helix 25	AC7	A	487	490	Right-handed 310
Helix 26	AC8	A	493	500	Right-handed alpha
Helix 27	AC9	A	550	555	Right-handed alpha
Helix 28	AD1	A	556	558	Right-handed 310
Helix 29	AD2	A	580	582	Right-handed 310
Helix 30	AD3	A	609	617	Right-handed alpha
Helix 31	AD4	A	653	661	Right-handed alpha
Helix 32	AD5	A	704	709	Right-handed alpha
Helix 33	AD6	A	726	731	Right-handed 310
Helix 34	AD7	B	40	52	Right-handed alpha
Helix 35	AD8	B	76	80	Right-handed 310
Helix 36	AD9	B	82	96	Right-handed alpha
Helix 37	AE1	B	108	124	Right-handed alpha
Helix 38	AE2	B	127	140	Right-handed alpha
Helix 39	AE3	B	143	158	Right-handed alpha
Helix 40	AE4	B	159	162	Right-handed 310
Helix 41	AE5	B	168	173	Right-handed alpha
Helix 42	AE6	B	174	177	Right-handed 310
Helix 43	AE7	B	179	193	Right-handed alpha
Helix 44	AE8	B	197	205	Right-handed alpha
Helix 45	AE9	B	227	231	Right-handed 310
Helix 46	AF1	B	232	237	Right-handed alpha
Helix 47	AF2	B	238	252	Right-handed alpha
Helix 48	AF3	B	261	266	Right-handed 310
Helix 49	AF4	B	267	290	Right-handed alpha
Helix 50	AF5	B	334	355	Right-handed alpha
Helix 51	AF6	B	369	371	Right-handed 310
Helix 52	AF7	B	372	382	Right-handed alpha
Helix 53	AF8	B	400	405	Right-handed 310
Helix 54	AF9	B	420	424	Right-handed 310
Helix 55	AG1	B	427	430	Right-handed 310
Helix 56	AG2	B	431	452	Right-handed alpha
Helix 57	AG3	B	456	461	Right-handed alpha
Helix 58	AG4	B	487	490	Right-handed 310
Helix 59	AG5	B	493	500	Right-handed alpha
Helix 60	AG6	B	550	555	Right-handed alpha
Helix 61	AG7	B	556	558	Right-handed 310
Helix 62	AG8	B	580	582	Right-handed 310
Helix 63	AG9	B	609	617	Right-handed alpha
Helix 64	AH1	B	653	661	Right-handed alpha
Helix 65	AH2	B	704	709	Right-handed alpha
Helix 66	AH3	B	726	731	Right-handed 310
Helix 67	AH4	C	40	52	Right-handed alpha
Helix 68	AH5	C	76	80	Right-handed 310
Helix 69	AH6	C	82	96	Right-handed alpha
Helix 70	AH7	C	108	124	Right-handed alpha
Helix 71	AH8	C	127	140	Right-handed alpha
Helix 72	AH9	C	143	158	Right-handed alpha
Helix 73	AI1	C	159	162	Right-handed 310
Helix 74	AI2	C	168	173	Right-handed alpha
Helix 75	AI3	C	174	177	Right-handed 310
Helix 76	AI4	C	179	193	Right-handed alpha
Helix 77	AI5	C	197	205	Right-handed alpha
Helix 78	AI6	C	227	231	Right-handed 310
Helix 79	AI7	C	232	237	Right-handed alpha
Helix 80	AI8	C	238	252	Right-handed alpha
Helix 81	AI9	C	261	266	Right-handed 310
Helix 82	AJ1	C	267	290	Right-handed alpha
Helix 83	AJ2	C	334	355	Right-handed alpha
Helix 84	AJ3	C	369	371	Right-handed 310
Helix 85	AJ4	C	372	382	Right-handed alpha
Helix 86	AJ5	C	400	405	Right-handed 310
Helix 87	AJ6	C	420	424	Right-handed 310
Helix 88	AJ7	C	427	430	Right-handed 310
Helix 89	AJ8	C	431	452	Right-handed alpha
Helix 90	AJ9	C	456	461	Right-handed alpha
Helix 91	AK1	C	487	490	Right-handed 310
Helix 92	AK2	C	493	500	Right-handed alpha
Helix 93	AK3	C	550	555	Right-handed alpha
Helix 94	AK4	C	556	558	Right-handed 310
Helix 95	AK5	C	580	582	Right-handed 310
Helix 96	AK6	C	609	617	Right-handed alpha
Helix 97	AK7	C	653	661	Right-handed alpha
Helix 98	AK8	C	704	709	Right-handed alpha
Helix 99	AK9	C	726	731	Right-handed 310
Helix 100	AL1	D	40	52	Right-handed alpha
Helix 101	AL2	D	76	80	Right-handed 310
Helix 102	AL3	D	82	96	Right-handed alpha
Helix 103	AL4	D	108	124	Right-handed alpha
Helix 104	AL5	D	127	140	Right-handed alpha
Helix 105	AL6	D	143	158	Right-handed alpha
Helix 106	AL7	D	159	162	Right-handed 310
Helix 107	AL8	D	168	173	Right-handed alpha
Helix 108	AL9	D	174	177	Right-handed 310
Helix 109	AM1	D	179	193	Right-handed alpha
Helix 110	AM2	D	197	205	Right-handed alpha
Helix 111	AM3	D	227	231	Right-handed 310
Helix 112	AM4	D	232	237	Right-handed alpha
Helix 113	AM5	D	238	252	Right-handed alpha
Helix 114	AM6	D	261	266	Right-handed 310
Helix 115	AM7	D	267	290	Right-handed alpha
Helix 116	AM8	D	334	355	Right-handed alpha
Helix 117	AM9	D	369	371	Right-handed 310
Helix 118	AN1	D	372	382	Right-handed alpha
Helix 119	AN2	D	400	405	Right-handed 310
Helix 120	AN3	D	420	424	Right-handed 310
Helix 121	AN4	D	427	430	Right-handed 310
Helix 122	AN5	D	431	452	Right-handed alpha
Helix 123	AN6	D	456	461	Right-handed alpha
Helix 124	AN7	D	487	490	Right-handed 310
Helix 125	AN8	D	493	500	Right-handed alpha
Helix 126	AN9	D	550	555	Right-handed alpha
Helix 127	AO1	D	556	558	Right-handed 310
Helix 128	AO2	D	580	582	Right-handed 310
Helix 129	AO3	D	609	617	Right-handed alpha
Helix 130	AO4	D	653	661	Right-handed alpha
Helix 131	AO5	D	704	709	Right-handed alpha
Helix 132	AO6	D	726	731	Right-handed 310
Helix 133	AO7	E	40	52	Right-handed alpha
Helix 134	AO8	E	76	80	Right-handed 310
Helix 135	AO9	E	82	96	Right-handed alpha
Helix 136	AP1	E	108	124	Right-handed alpha
Helix 137	AP2	E	127	140	Right-handed alpha
Helix 138	AP3	E	143	158	Right-handed alpha
Helix 139	AP4	E	159	162	Right-handed 310
Helix 140	AP5	E	168	173	Right-handed alpha
Helix 141	AP6	E	174	177	Right-handed 310
Helix 142	AP7	E	179	193	Right-handed alpha
Helix 143	AP8	E	197	205	Right-handed alpha
Helix 144	AP9	E	227	231	Right-handed 310
Helix 145	AQ1	E	232	237	Right-handed alpha
Helix 146	AQ2	E	238	252	Right-handed alpha
Helix 147	AQ3	E	261	266	Right-handed 310
Helix 148	AQ4	E	267	290	Right-handed alpha
Helix 149	AQ5	E	334	355	Right-handed alpha
Helix 150	AQ6	E	369	371	Right-handed 310
Helix 151	AQ7	E	372	382	Right-handed alpha
Helix 152	AQ8	E	400	405	Right-handed 310
Helix 153	AQ9	E	420	424	Right-handed 310
Helix 154	AR1	E	427	430	Right-handed 310
Helix 155	AR2	E	431	452	Right-handed alpha
Helix 156	AR3	E	456	461	Right-handed alpha
Helix 157	AR4	E	487	490	Right-handed 310
Helix 158	AR5	E	493	500	Right-handed alpha
Helix 159	AR6	E	550	555	Right-handed alpha
Helix 160	AR7	E	556	558	Right-handed 310
Helix 161	AR8	E	580	582	Right-handed 310
Helix 162	AR9	E	609	617	Right-handed alpha
Helix 163	AS1	E	653	661	Right-handed alpha
Helix 164	AS2	E	704	709	Right-handed alpha
Helix 165	AS3	E	726	731	Right-handed 310
Helix 166	AS4	F	40	52	Right-handed alpha
Helix 167	AS5	F	76	80	Right-handed 310
Helix 168	AS6	F	82	96	Right-handed alpha
Helix 169	AS7	F	108	124	Right-handed alpha
Helix 170	AS8	F	127	140	Right-handed alpha
Helix 171	AS9	F	143	158	Right-handed alpha
Helix 172	AT1	F	159	162	Right-handed 310
Helix 173	AT2	F	168	173	Right-handed alpha
Helix 174	AT3	F	174	177	Right-handed 310
Helix 175	AT4	F	179	193	Right-handed alpha
Helix 176	AT5	F	197	205	Right-handed alpha
Helix 177	AT6	F	227	231	Right-handed 310
Helix 178	AT7	F	232	237	Right-handed alpha
Helix 179	AT8	F	238	252	Right-handed alpha
Helix 180	AT9	F	261	266	Right-handed 310
Helix 181	AU1	F	267	290	Right-handed alpha
Helix 182	AU2	F	334	355	Right-handed alpha
Helix 183	AU3	F	369	371	Right-handed 310
Helix 184	AU4	F	372	382	Right-handed alpha
Helix 185	AU5	F	400	405	Right-handed 310
Helix 186	AU6	F	420	424	Right-handed 310
Helix 187	AU7	F	427	430	Right-handed 310
Helix 188	AU8	F	431	452	Right-handed alpha
Helix 189	AU9	F	456	461	Right-handed alpha
Helix 190	AV1	F	487	490	Right-handed 310
Helix 191	AV2	F	493	500	Right-handed alpha
Helix 192	AV3	F	550	555	Right-handed alpha
Helix 193	AV4	F	556	558	Right-handed 310
Helix 194	AV5	F	580	582	Right-handed 310
Helix 195	AV6	F	609	617	Right-handed alpha
Helix 196	AV7	F	653	661	Right-handed alpha
Helix 197	AV8	F	704	709	Right-handed alpha
Helix 198	AV9	F	726	731	Right-handed 310

There are 36 sheets in PDB entry 8CAN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	209	first strand
Strand 2	A	213	218	anti-parallel
Strand 3	A	505	515	parallel
Strand 4	A	475	485	anti-parallel
Strand 5	A	692	701	parallel
Strand 6	A	632	642	anti-parallel
Strand 7	A	530	540	anti-parallel
Strand 8	A	559	568	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	304	first strand
Strand 2	A	327	328	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	364	366	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	465	472	first strand
Strand 2	A	519	526	anti-parallel
Strand 3	A	571	578	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	585	586	first strand
Strand 2	A	618	619	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	719	720	first strand
Strand 2	A	733	734	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	209	first strand
Strand 2	B	213	218	anti-parallel
Strand 3	B	505	515	parallel
Strand 4	B	475	485	anti-parallel
Strand 5	B	692	701	parallel
Strand 6	B	632	642	anti-parallel
Strand 7	B	530	540	anti-parallel
Strand 8	B	559	568	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	303	304	first strand
Strand 2	B	327	328	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	358	first strand
Strand 2	B	364	366	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	465	472	first strand
Strand 2	B	519	526	anti-parallel
Strand 3	B	571	578	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	585	586	first strand
Strand 2	B	618	619	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	720	first strand
Strand 2	B	733	734	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	209	first strand
Strand 2	C	213	218	anti-parallel
Strand 3	C	505	515	parallel
Strand 4	C	475	485	anti-parallel
Strand 5	C	692	701	parallel
Strand 6	C	632	642	anti-parallel
Strand 7	C	530	540	anti-parallel
Strand 8	C	559	568	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	303	304	first strand
Strand 2	C	327	328	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	356	358	first strand
Strand 2	C	364	366	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	465	472	first strand
Strand 2	C	519	526	anti-parallel
Strand 3	C	571	578	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	585	586	first strand
Strand 2	C	618	619	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	719	720	first strand
Strand 2	C	733	734	anti-parallel

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There are 8 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	206	209	first strand
Strand 2	D	213	218	anti-parallel
Strand 3	D	505	515	parallel
Strand 4	D	475	485	anti-parallel
Strand 5	D	692	701	parallel
Strand 6	D	632	642	anti-parallel
Strand 7	D	530	540	anti-parallel
Strand 8	D	559	568	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	303	304	first strand
Strand 2	D	327	328	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	356	358	first strand
Strand 2	D	364	366	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	465	472	first strand
Strand 2	D	519	526	anti-parallel
Strand 3	D	571	578	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	585	586	first strand
Strand 2	D	618	619	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	719	720	first strand
Strand 2	D	733	734	anti-parallel

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There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	206	209	first strand
Strand 2	E	213	218	anti-parallel
Strand 3	E	505	515	parallel
Strand 4	E	475	485	anti-parallel
Strand 5	E	692	701	parallel
Strand 6	E	632	642	anti-parallel
Strand 7	E	530	540	anti-parallel
Strand 8	E	559	568	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	303	304	first strand
Strand 2	E	327	328	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	356	358	first strand
Strand 2	E	364	366	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	465	472	first strand
Strand 2	E	519	526	anti-parallel
Strand 3	E	571	578	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	585	586	first strand
Strand 2	E	618	619	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	719	720	first strand
Strand 2	E	733	734	anti-parallel

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There are 8 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	206	209	first strand
Strand 2	F	213	218	anti-parallel
Strand 3	F	505	515	parallel
Strand 4	F	475	485	anti-parallel
Strand 5	F	692	701	parallel
Strand 6	F	632	642	anti-parallel
Strand 7	F	530	540	anti-parallel
Strand 8	F	559	568	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	303	304	first strand
Strand 2	F	327	328	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	356	358	first strand
Strand 2	F	364	366	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	465	472	first strand
Strand 2	F	519	526	anti-parallel
Strand 3	F	571	578	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	585	586	first strand
Strand 2	F	618	619	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	719	720	first strand
Strand 2	F	733	734	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8CAN

Analysis of interatomic Contacts of Structural Units in PDB entry:
8CAN