Analysis of interatomic Contacts of Structural Units in PDB entry:
8CE3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CE3 entry

There are 2 chains in PDB entry 8CE3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 214LEU 728
B
 SER 214LEU 728
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 8CE3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
222 230Right-handed alpha
Helix 2
AA2
A
231 234Right-handed 310
Helix 3
AA3
A
235 260Right-handed alpha
Helix 4
AA4
A
275 282Right-handed 310
Helix 5
AA5
A
284 293Right-handed 310
Helix 6
AA6
A
294 311Right-handed alpha
Helix 7
AA7
A
320 329Right-handed alpha
Helix 8
AA8
A
340 351Right-handed alpha
Helix 9
AA9
A
352 359Right-handed 310
Helix 10
AB1
A
370 375Right-handed alpha
Helix 11
AB2
A
375 382Right-handed alpha
Helix 12
AB3
A
394 396Right-handed 310
Helix 13
AB4
A
442 447Right-handed 310
Helix 14
AB5
A
449 460Right-handed alpha
Helix 15
AB6
A
485 495Right-handed alpha
Helix 16
AB7
A
509 517Right-handed alpha
Helix 17
AB8
A
535 539Right-handed 310
Helix 18
AB9
A
551 558Right-handed alpha
Helix 19
AC1
A
570 584Right-handed alpha
Helix 20
AC2
A
591 594Right-handed 310
Helix 21
AC3
A
595 610Right-handed alpha
Helix 22
AC4
A
621 625Right-handed 310
Helix 23
AC5
A
635 643Right-handed alpha
Helix 24
AC6
A
649 656Right-handed 310
Helix 25
AC7
A
657 663Right-handed alpha
Helix 26
AC8
A
694 698Right-handed 310
Helix 27
AC9
B
222 229Right-handed alpha
Helix 28
AD1
B
232 260Right-handed alpha
Helix 29
AD2
B
275 278Right-handed 310
Helix 30
AD3
B
296 311Right-handed alpha
Helix 31
AD4
B
320 330Right-handed alpha
Helix 32
AD5
B
340 351Right-handed alpha
Helix 33
AD6
B
352 359Right-handed 310
Helix 34
AD7
B
370 375Right-handed alpha
Helix 35
AD8
B
375 382Right-handed alpha
Helix 36
AD9
B
394 396Right-handed 310
Helix 37
AE1
B
426 431Right-handed alpha
Helix 38
AE2
B
442 447Right-handed 310
Helix 39
AE3
B
449 460Right-handed alpha
Helix 40
AE4
B
485 495Right-handed alpha
Helix 41
AE5
B
509 517Right-handed alpha
Helix 42
AE6
B
535 539Right-handed 310
Helix 43
AE7
B
551 558Right-handed alpha
Helix 44
AE8
B
570 584Right-handed alpha
Helix 45
AE9
B
591 594Right-handed 310
Helix 46
AF1
B
595 610Right-handed alpha
Helix 47
AF2
B
621 625Right-handed 310
Helix 48
AF3
B
635 643Right-handed alpha
Helix 49
AF4
B
649 656Right-handed 310
Helix 50
AF5
B
657 663Right-handed alpha
Helix 51
AF6
B
694 698Right-handed 310
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There are 10 sheets in PDB entry 8CE3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 318first strand
Strand 2
A
269 273parallel
Strand 3
A
335 339parallel
Strand 4
A
361 364parallel
Strand 5
A
398 400parallel
Strand 6
A
409 410parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
479 480first strand
Strand 2
A
461 464parallel
Strand 3
A
432 438parallel
Strand 4
A
496 500parallel
Strand 5
A
520 530parallel
Strand 6
A
547 549anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
479 480first strand
Strand 2
A
461 464parallel
Strand 3
A
432 438parallel
Strand 4
A
496 500parallel
Strand 5
A
520 530parallel
Strand 6
A
563 566parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
626 630first strand
Strand 2
A
708 714anti-parallel
Strand 3
A
646 647anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
626 630first strand
Strand 2
A
708 714anti-parallel
Strand 3
A
681 683anti-parallel
Strand 4
A
688 692anti-parallel
Strand 5
A
670 674parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
314 318first strand
Strand 2
B
269 273parallel
Strand 3
B
335 339parallel
Strand 4
B
361 364parallel
Strand 5
B
398 400parallel
Strand 6
B
409 410parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
479 480first strand
Strand 2
B
461 464parallel
Strand 3
B
432 438parallel
Strand 4
B
496 500parallel
Strand 5
B
520 530parallel
Strand 6
B
547 549anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
479 480first strand
Strand 2
B
461 464parallel
Strand 3
B
432 438parallel
Strand 4
B
496 500parallel
Strand 5
B
520 530parallel
Strand 6
B
563 566parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
626 630first strand
Strand 2
B
708 714anti-parallel
Strand 3
B
646 647anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
626 630first strand
Strand 2
B
708 714anti-parallel
Strand 3
B
681 683anti-parallel
Strand 4
B
688 692anti-parallel
Strand 5
B
670 674parallel
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