Analysis of interatomic Contacts of Structural Units in PDB entry:
8CE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CE9 entry

There are 2 chains in PDB entry 8CE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 0GLY 189
A
 SER 0GLY 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8CE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
14 33Right-handed alpha
Helix 2
AA2
B
53 60Right-handed alpha
Helix 3
AA3
B
62 68Right-handed alpha
Helix 4
AA4
B
78 90Right-handed alpha
Helix 5
AA5
B
92 96Right-handed 310
Helix 6
AA6
B
119 122Right-handed 310
Helix 7
AA7
B
123 130Right-handed alpha
Helix 8
AA8
B
141 144Right-handed 310
Helix 9
AA9
B
149 156Right-handed alpha
Helix 10
AB1
B
159 163Right-handed alpha
Helix 11
AB2
B
170 175Right-handed 310
Helix 12
AB3
B
176 189Right-handed alpha
Helix 13
AB4
A
14 33Right-handed alpha
Helix 14
AB5
A
53 60Right-handed alpha
Helix 15
AB6
A
62 68Right-handed alpha
Helix 16
AB7
A
78 90Right-handed alpha
Helix 17
AB8
A
92 96Right-handed 310
Helix 18
AB9
A
119 122Right-handed 310
Helix 19
AC1
A
123 130Right-handed alpha
Helix 20
AC2
A
141 144Right-handed 310
Helix 21
AC3
A
145 156Right-handed alpha
Helix 22
AC4
A
159 162Right-handed 310
Helix 23
AC5
A
169 175Right-handed 310
Helix 24
AC6
A
176 189Right-handed alpha
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There are 2 sheets in PDB entry 8CE9. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 52first strand
Strand 2
B
37 44anti-parallel
Strand 3
B
1 8parallel
Strand 4
B
102 109parallel
Strand 5
B
132 139parallel
Strand 6
B
164 167parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
37 44anti-parallel
Strand 3
A
1 8parallel
Strand 4
A
102 109parallel
Strand 5
A
133 139parallel
Strand 6
A
164 167parallel
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