Analysis of interatomic Contacts of Structural Units in PDB entry:
8CG3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CG3 entry

There are 5 chains in PDB entry 8CG3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
U
 ARG 272GLN 360
A
 ARG 272GLN 360
B
 ARG 272GLN 360
C
 ARG 272GLN 360
D
 ARG 272GLN 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 8CG3

There are 8 sheets in PDB entry 8CG3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 275first strand
Strand 2
U
273 275parallel
Strand 3
B
273 275parallel
Strand 4
C
273 275parallel
Strand 5
D
273 275parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 293first strand
Strand 2
U
292 293parallel
Strand 3
B
292 293parallel
Strand 4
C
292 293parallel
Strand 5
D
292 293parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 300first strand
Strand 2
U
296 300parallel
Strand 3
B
296 300parallel
Strand 4
C
296 300parallel
Strand 5
D
296 300parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 308first strand
Strand 2
U
306 308parallel
Strand 3
B
306 308parallel
Strand 4
C
306 308parallel
Strand 5
D
306 308parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 315first strand
Strand 2
U
311 315parallel
Strand 3
B
311 315parallel
Strand 4
C
311 315parallel
Strand 5
D
311 315parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 336first strand
Strand 2
U
321 336parallel
Strand 3
B
321 336parallel
Strand 4
C
321 336parallel
Strand 5
D
321 336parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 347first strand
Strand 2
U
343 347parallel
Strand 3
B
343 347parallel
Strand 4
C
343 347parallel
Strand 5
D
343 347parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 356first strand
Strand 2
U
353 356parallel
Strand 3
B
353 356parallel
Strand 4
C
353 356parallel
Strand 5
D
353 356parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il