Analysis of interatomic Contacts of Structural Units in PDB entry:
8CKS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CKS entry

There is 1 chain in PDB entry 8CKS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1LEU 585
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 8CKS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 15Right-handed alpha
Helix 2
AA2
A
15 29Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 77Right-handed alpha
Helix 5
AA5
A
79 84Right-handed alpha
Helix 6
AA6
A
85 89Right-handed 310
Helix 7
AA7
A
96 106Right-handed alpha
Helix 8
AA8
A
119 130Right-handed alpha
Helix 9
AA9
A
130 144Right-handed alpha
Helix 10
AB1
A
150 169Right-handed alpha
Helix 11
AB2
A
174 207Right-handed alpha
Helix 12
AB3
A
208 223Right-handed alpha
Helix 13
AB4
A
227 248Right-handed alpha
Helix 14
AB5
A
249 267Right-handed alpha
Helix 15
AB6
A
267 272Right-handed alpha
Helix 16
AB7
A
273 276Right-handed 310
Helix 17
AB8
A
277 281Right-handed 310
Helix 18
AB9
A
282 293Right-handed alpha
Helix 19
AC1
A
305 310Right-handed alpha
Helix 20
AC2
A
315 322Right-handed alpha
Helix 21
AC3
A
322 337Right-handed alpha
Helix 22
AC4
A
342 362Right-handed alpha
Helix 23
AC5
A
365 371Right-handed alpha
Helix 24
AC6
A
372 375Right-handed 310
Helix 25
AC7
A
376 398Right-handed alpha
Helix 26
AC8
A
399 415Right-handed alpha
Helix 27
AC9
A
419 438Right-handed alpha
Helix 28
AD1
A
441 443Right-handed 310
Helix 29
AD2
A
444 467Right-handed alpha
Helix 30
AD3
A
470 479Right-handed alpha
Helix 31
AD4
A
480 482Right-handed 310
Helix 32
AD5
A
483 491Right-handed alpha
Helix 33
AD6
A
517 536Right-handed alpha
Helix 34
AD7
A
540 560Right-handed alpha
Helix 35
AD8
A
566 581Right-handed alpha
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There are no sheets in PDB entry 8CKS
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