Analysis of interatomic Contacts of Structural Units in PDB entry:
8CM1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CM1 entry

There is 1 chain in PDB entry 8CM1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 33PRO 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 8CM1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 48Right-handed alpha
Helix 2
AA2
A
116 126Right-handed alpha
Helix 3
AA3
A
130 138Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8CM1.

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 114first strand
Strand 2
A
101 105anti-parallel
Strand 3
A
91 98anti-parallel
Strand 4
A
79 85anti-parallel
Strand 5
A
66 76anti-parallel
Strand 6
A
52 61anti-parallel
Strand 7
A
198 209anti-parallel
Strand 8
A
183 195anti-parallel
Strand 9
A
166 180anti-parallel
Strand 10
A
156 163anti-parallel
Strand 11
A
147 150anti-parallel
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