Analysis of interatomic Contacts of Structural Units in PDB entry:
8CON


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CON entry

There is 1 chain in PDB entry 8CON (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8CON. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 56Right-handed alpha
Helix 2
AA2
A
168 173Right-handed alpha
Helix 3
AA3
A
177 188Right-handed alpha
Helix 4
AA4
A
204 217Right-handed alpha
Helix 5
AA5
A
230 237Right-handed alpha
Helix 6
AA6
A
245 249Right-handed 310
Helix 7
AA7
A
252 262Right-handed alpha
Helix 8
AA8
A
274 284Right-handed alpha
Helix 9
AA9
A
308 313Right-handed alpha
Helix 10
AB1
A
321 325Right-handed 310
Helix 11
AB2
A
330 340Right-handed alpha
Helix 12
AB3
A
345 347Right-handed 310
Helix 13
AB4
A
357 368Right-handed alpha
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There are 4 sheets in PDB entry 8CON. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 14first strand
Strand 2
A
23 29anti-parallel
Strand 3
A
133 135anti-parallel
Strand 4
A
138 139anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 156first strand
Strand 2
A
36 45anti-parallel
Strand 3
A
70 78anti-parallel
Strand 4
A
90 93anti-parallel
Strand 5
A
160 162anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 156first strand
Strand 2
A
36 45anti-parallel
Strand 3
A
372 376anti-parallel
Strand 4
A
349 354parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 244first strand
Strand 2
A
221 225parallel
Strand 3
A
197 201parallel
Strand 4
A
267 270parallel
Strand 5
A
291 294parallel
Strand 6
A
316 319parallel
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