Analysis of interatomic Contacts of Structural Units in PDB entry:
8CP3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CP3 entry

There are 2 chains in PDB entry 8CP3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 3PHE 257
B
 PRO 0GLY 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8CP3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 20Right-handed alpha
Helix 2
AA2
A
31 45Right-handed alpha
Helix 3
AA3
A
58 72Right-handed alpha
Helix 4
AA4
A
91 114Right-handed alpha
Helix 5
AA5
A
124 130Right-handed 310
Helix 6
AA6
A
133 140Right-handed alpha
Helix 7
AA7
A
145 150Right-handed alpha
Helix 8
AA8
A
153 164Right-handed alpha
Helix 9
AA9
A
185 204Right-handed alpha
Helix 10
AB1
A
223 231Right-handed alpha
Helix 11
AB2
A
232 246Right-handed alpha
Helix 12
AB3
B
5 20Right-handed alpha
Helix 13
AB4
B
31 45Right-handed alpha
Helix 14
AB5
B
58 72Right-handed alpha
Helix 15
AB6
B
93 114Right-handed alpha
Helix 16
AB7
B
124 130Right-handed 310
Helix 17
AB8
B
133 140Right-handed alpha
Helix 18
AB9
B
145 150Right-handed alpha
Helix 19
AC1
B
153 164Right-handed alpha
Helix 20
AC2
B
188 204Right-handed alpha
Helix 21
AC3
B
223 231Right-handed alpha
Helix 22
AC4
B
232 246Right-handed alpha
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There are 3 sheets in PDB entry 8CP3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 80first strand
Strand 2
A
46 53parallel
Strand 3
A
23 27parallel
Strand 4
A
118 120parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 214first strand
Strand 2
A
217 222anti-parallel
Strand 3
A
252 254parallel
Strand 4
B
250 254anti-parallel
Strand 5
B
217 220parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 80first strand
Strand 2
B
46 53parallel
Strand 3
B
23 27parallel
Strand 4
B
118 120parallel
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