Analysis of interatomic Contacts of Structural Units in PDB entry:
8CPQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CPQ entry

There is 1 chain in PDB entry 8CPQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 270LEU 419
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 8CPQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
283 294Right-handed alpha
Helix 2
AA2
A
304 327Right-handed alpha
Helix 3
AA3
A
328 331Right-handed 310
Helix 4
AA4
A
342 349Right-handed alpha
Helix 5
AA5
A
377 390Right-handed alpha
Helix 6
AA6
A
399 402Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8CPQ.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 280first strand
Strand 2
A
333 338parallel
Strand 3
A
297 302parallel
Strand 4
A
358 363anti-parallel
Strand 5
A
368 371anti-parallel
Strand 6
A
396 397anti-parallel
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