Analysis of interatomic Contacts of Structural Units in PDB entry:
8CQ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CQ3 entry

There is 1 chain in PDB entry 8CQ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 24ASP 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8CQ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 40Right-handed alpha
Helix 2
AA2
A
40 51Right-handed alpha
Helix 3
AA3
A
57 71Right-handed alpha
Helix 4
AA4
A
76 103Right-handed alpha
Helix 5
AA5
A
108 112Right-handed 310
Helix 6
AA6
A
118 141Right-handed alpha
Helix 7
AA7
A
145 154Right-handed alpha
Helix 8
AA8
A
159 174Right-handed alpha
Helix 9
AA9
A
183 192Right-handed alpha
Helix 10
AB1
A
216 230Right-handed alpha
Helix 11
AB2
A
242 249Right-handed alpha
Helix 12
AB3
A
264 268Right-handed 310
Helix 13
AB4
A
287 292Right-handed 310
Helix 14
AB5
A
294 299Right-handed alpha
Helix 15
AB6
A
311 321Right-handed alpha
Helix 16
AB7
A
334 341Right-handed alpha
Helix 17
AB8
A
351 361Right-handed alpha
Helix 18
AB9
A
384 400Right-handed alpha
Helix 19
AC1
A
403 411Right-handed alpha
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There are 4 sheets in PDB entry 8CQ3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 237first strand
Strand 2
A
193 198parallel
Strand 3
A
254 255parallel
Strand 4
A
375 381anti-parallel
Strand 5
A
270 278anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
214 215anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 350first strand
Strand 2
A
280 285anti-parallel
Strand 3
A
364 366anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 307first strand
Strand 2
A
325 328parallel
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