Analysis of interatomic Contacts of Structural Units in PDB entry:
8CR2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CR2 entry

There are 4 chains in PDB entry 8CR2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 23PRO 344
B
 PRO 23PRO 344
C
 LEU 1028TYR 1124
D
 ARG 189PRO 1172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8CR2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 34Right-handed alpha
Helix 2
AA2
A
49 65Right-handed alpha
Helix 3
AA3
A
77 84Right-handed alpha
Helix 4
AA4
A
141 158Right-handed alpha
Helix 5
AA5
A
173 176Right-handed 310
Helix 6
AA6
A
177 192Right-handed alpha
Helix 7
AA7
A
217 238Right-handed alpha
Helix 8
AA8
A
251 268Right-handed alpha
Helix 9
AA9
A
290 310Right-handed alpha
Helix 10
AB1
A
327 340Right-handed alpha
Helix 11
AB2
B
28 33Right-handed alpha
Helix 12
AB3
B
49 65Right-handed alpha
Helix 13
AB4
B
77 84Right-handed alpha
Helix 14
AB5
B
141 159Right-handed alpha
Helix 15
AB6
B
172 178Right-handed alpha
Helix 16
AB7
B
178 190Right-handed alpha
Helix 17
AB8
B
221 238Right-handed alpha
Helix 18
AB9
B
251 268Right-handed alpha
Helix 19
AC1
B
290 310Right-handed alpha
Helix 20
AC2
B
327 337Right-handed alpha
Helix 21
AC3
C
1029 1039Right-handed alpha
Helix 22
AC4
C
1039 1062Right-handed alpha
Helix 23
AC5
C
1068 1124Right-handed alpha
Helix 24
AC6
D
190 207Right-handed alpha
Helix 25
AC7
D
208 210Right-handed 310
Helix 26
AC8
D
214 234Right-handed alpha
Helix 27
AC9
D
255 284Right-handed alpha
Helix 28
AD1
D
285 291Right-handed alpha
Helix 29
AD2
D
1006 1035Right-handed alpha
Helix 30
AD3
D
1035 1062Right-handed alpha
Helix 31
AD4
D
1068 1123Right-handed alpha
Helix 32
AD5
D
1150 1161Right-handed alpha
Helix 33
AD6
D
1162 1171Right-handed alpha
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There are 4 sheets in PDB entry 8CR2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 70first strand
Strand 2
A
162 164parallel
Strand 3
A
39 43parallel
Strand 4
A
242 247parallel
Strand 5
A
272 276parallel
Strand 6
A
314 316parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
101 102anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 72first strand
Strand 2
B
163 166parallel
Strand 3
B
39 43parallel
Strand 4
B
242 249parallel
Strand 5
B
272 278parallel
Strand 6
B
314 316parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 69first strand
Strand 2
B
100 101parallel
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