Analysis of interatomic Contacts of Structural Units in PDB entry:
8CR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CR6 entry

There are 2 chains in PDB entry 8CR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 23ARG 332
B
 ALA 31ALA 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 8CR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
81 85Right-handed 310
Helix 2
AA2
A
226 231Right-handed alpha
Helix 3
AA3
B
32 55Right-handed alpha
Helix 4
AA4
B
76 81Right-handed alpha
Helix 5
AA5
B
83 87Right-handed 310
Helix 6
AA6
B
113 144Right-handed alpha
Helix 7
AA7
B
152 168Right-handed alpha
Helix 8
AA8
B
183 213Right-handed alpha
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There are 8 sheets in PDB entry 8CR6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
30 35anti-parallel
Strand 3
A
99 108parallel
Strand 4
A
87 91anti-parallel
Strand 5
A
59 61anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
30 35anti-parallel
Strand 3
A
99 108parallel
Strand 4
A
111 112anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 49first strand
Strand 2
A
74 79anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
136 143anti-parallel
Strand 3
A
183 193anti-parallel
Strand 4
A
165 167anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 129first strand
Strand 2
A
136 143anti-parallel
Strand 3
A
183 193anti-parallel
Strand 4
A
171 178anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 155first strand
Strand 2
A
206 214anti-parallel
Strand 3
A
217 225anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 243first strand
Strand 2
A
249 254anti-parallel
Strand 3
A
300 303anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
268 274anti-parallel
Strand 3
A
309 316anti-parallel
Strand 4
A
327 330anti-parallel
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