Analysis of interatomic Contacts of Structural Units in PDB entry:
8CR7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CR7 entry

There are 2 chains in PDB entry 8CR7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1PRO 298
B
 ALA 1PRO 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8CR7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 92Right-handed alpha
Helix 2
AA2
A
134 150Right-handed alpha
Helix 3
AA3
A
156 180Right-handed alpha
Helix 4
AA4
A
202 207Right-handed 310
Helix 5
AA5
A
212 216Right-handed 310
Helix 6
AA6
A
221 226Right-handed alpha
Helix 7
AA7
A
226 238Right-handed alpha
Helix 8
AA8
A
243 258Right-handed alpha
Helix 9
AA9
A
264 279Right-handed alpha
Helix 10
AB1
A
282 293Right-handed alpha
Helix 11
AB2
B
71 92Right-handed alpha
Helix 12
AB3
B
134 150Right-handed alpha
Helix 13
AB4
B
156 180Right-handed alpha
Helix 14
AB5
B
187 191Right-handed 310
Helix 15
AB6
B
202 207Right-handed 310
Helix 16
AB7
B
212 216Right-handed 310
Helix 17
AB8
B
221 226Right-handed alpha
Helix 18
AB9
B
226 238Right-handed alpha
Helix 19
AC1
B
243 258Right-handed alpha
Helix 20
AC2
B
264 279Right-handed alpha
Helix 21
AC3
B
282 293Right-handed alpha
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There are 8 sheets in PDB entry 8CR7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
24 25anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
13 17anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
100 106parallel
Strand 3
A
120 123parallel
Strand 4
A
113 115anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
198 199anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 3first strand
Strand 2
B
24 25anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 9first strand
Strand 2
B
13 17anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 41first strand
Strand 2
B
100 104parallel
Strand 3
B
120 122parallel
Strand 4
B
113 115anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
198 199anti-parallel
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