Analysis of interatomic Contacts of Structural Units in PDB entry:
8CRT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CRT entry

There are 8 chains in PDB entry 8CRT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
K
 SER 2PHE 417
L
 MET 1ARG 409
Q
 MET 1ARG 409
P
 ALA 59ALA 91
B
 GLY 78LEU 117
D
 GLY 78LEU 117
C
 PRO 371THR 894
E
 PRO 371THR 894
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are114 helices in PDB entry 8CRT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
K
11 31Right-handed alpha
Helix 2
AA2
K
43 66Right-handed alpha
Helix 3
AA3
K
72 99Right-handed alpha
Helix 4
AA4
K
109 127Right-handed alpha
Helix 5
AA5
K
128 130Right-handed 310
Helix 6
AA6
K
135 162Right-handed alpha
Helix 7
AA7
K
165 170Right-handed 310
Helix 8
AA8
K
171 187Right-handed alpha
Helix 9
AA9
K
202 220Right-handed alpha
Helix 10
AB1
K
221 223Right-handed 310
Helix 11
AB2
K
230 256Right-handed alpha
Helix 12
AB3
K
266 274Right-handed alpha
Helix 13
AB4
K
275 281Right-handed alpha
Helix 14
AB5
K
284 288Right-handed 310
Helix 15
AB6
K
290 312Right-handed alpha
Helix 16
AB7
K
313 315Right-handed 310
Helix 17
AB8
K
326 350Right-handed alpha
Helix 18
AB9
K
361 389Right-handed alpha
Helix 19
AC1
K
390 394Right-handed 310
Helix 20
AC2
K
397 401Right-handed 310
Helix 21
AC3
L
3 23Right-handed alpha
Helix 22
AC4
L
50 69Right-handed alpha
Helix 23
AC5
L
75 104Right-handed alpha
Helix 24
AC6
L
111 132Right-handed alpha
Helix 25
AC7
L
137 162Right-handed alpha
Helix 26
AC8
L
174 189Right-handed alpha
Helix 27
AC9
L
204 228Right-handed alpha
Helix 28
AD1
L
233 262Right-handed alpha
Helix 29
AD2
L
263 266Right-handed 310
Helix 30
AD3
L
268 275Right-handed alpha
Helix 31
AD4
L
277 283Right-handed alpha
Helix 32
AD5
L
291 321Right-handed alpha
Helix 33
AD6
L
329 351Right-handed alpha
Helix 34
AD7
L
357 384Right-handed alpha
Helix 35
AD8
L
398 402Right-handed 310
Helix 36
AD9
Q
3 23Right-handed alpha
Helix 37
AE1
Q
47 69Right-handed alpha
Helix 38
AE2
Q
75 104Right-handed alpha
Helix 39
AE3
Q
111 130Right-handed alpha
Helix 40
AE4
Q
137 162Right-handed alpha
Helix 41
AE5
Q
174 189Right-handed alpha
Helix 42
AE6
Q
191 195Right-handed 310
Helix 43
AE7
Q
204 228Right-handed alpha
Helix 44
AE8
Q
233 262Right-handed alpha
Helix 45
AE9
Q
263 266Right-handed 310
Helix 46
AF1
Q
268 275Right-handed alpha
Helix 47
AF2
Q
277 283Right-handed alpha
Helix 48
AF3
Q
292 321Right-handed alpha
Helix 49
AF4
Q
329 351Right-handed alpha
Helix 50
AF5
Q
357 384Right-handed alpha
Helix 51
AF6
Q
398 402Right-handed 310
Helix 52
AF7
P
60 91Right-handed alpha
Helix 53
AF8
B
88 114Right-handed alpha
Helix 54
AF9
D
88 114Right-handed alpha
Helix 55
AG1
C
379 390Right-handed alpha
Helix 56
AG2
C
391 393Right-handed 310
Helix 57
AG3
C
394 399Right-handed alpha
Helix 58
AG4
C
402 431Right-handed alpha
Helix 59
AG5
C
436 455Right-handed alpha
Helix 60
AG6
C
465 483Right-handed alpha
Helix 61
AG7
C
485 507Right-handed alpha
Helix 62
AG8
C
508 516Right-handed 310
Helix 63
AG9
C
517 547Right-handed alpha
Helix 64
AH1
C
569 593Right-handed alpha
Helix 65
AH2
C
598 608Right-handed alpha
Helix 66
AH3
C
608 623Right-handed alpha
Helix 67
AH4
C
660 667Right-handed alpha
Helix 68
AH5
C
667 690Right-handed alpha
Helix 69
AH6
C
691 695Right-handed 310
Helix 70
AH7
C
701 719Right-handed alpha
Helix 71
AH8
C
727 738Right-handed alpha
Helix 72
AH9
C
760 772Right-handed alpha
Helix 73
AI1
C
776 781Right-handed alpha
Helix 74
AI2
C
784 799Right-handed alpha
Helix 75
AI3
C
803 811Right-handed alpha
Helix 76
AI4
C
812 814Right-handed 310
Helix 77
AI5
C
815 819Right-handed 310
Helix 78
AI6
C
822 827Right-handed alpha
Helix 79
AI7
C
829 852Right-handed alpha
Helix 80
AI8
C
855 857Right-handed 310
Helix 81
AI9
C
858 865Right-handed alpha
Helix 82
AJ1
C
865 872Right-handed alpha
Helix 83
AJ2
C
872 878Right-handed alpha
Helix 84
AJ3
C
879 887Right-handed alpha
Helix 85
AJ4
E
379 390Right-handed alpha
Helix 86
AJ5
E
391 393Right-handed 310
Helix 87
AJ6
E
394 399Right-handed alpha
Helix 88
AJ7
E
402 431Right-handed alpha
Helix 89
AJ8
E
436 455Right-handed alpha
Helix 90
AJ9
E
465 483Right-handed alpha
Helix 91
AK1
E
485 507Right-handed alpha
Helix 92
AK2
E
508 516Right-handed 310
Helix 93
AK3
E
517 547Right-handed alpha
Helix 94
AK4
E
569 593Right-handed alpha
Helix 95
AK5
E
598 608Right-handed alpha
Helix 96
AK6
E
608 623Right-handed alpha
Helix 97
AK7
E
660 667Right-handed alpha
Helix 98
AK8
E
667 690Right-handed alpha
Helix 99
AK9
E
691 695Right-handed 310
Helix 100
AL1
E
701 719Right-handed alpha
Helix 101
AL2
E
727 738Right-handed alpha
Helix 102
AL3
E
760 772Right-handed alpha
Helix 103
AL4
E
776 781Right-handed alpha
Helix 104
AL5
E
784 799Right-handed alpha
Helix 105
AL6
E
803 812Right-handed alpha
Helix 106
AL7
E
813 814Right-handed 310
Helix 107
AL8
E
815 819Right-handed 310
Helix 108
AL9
E
822 827Right-handed alpha
Helix 109
AM1
E
829 852Right-handed alpha
Helix 110
AM2
E
855 857Right-handed 310
Helix 111
AM3
E
858 865Right-handed alpha
Helix 112
AM4
E
865 872Right-handed alpha
Helix 113
AM5
E
873 877Right-handed 310
Helix 114
AM6
E
879 887Right-handed alpha
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There are 7 sheets in PDB entry 8CRT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
32 33first strand
Strand 2
K
106 107parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
24 25first strand
Strand 2
L
108 109parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
24 25first strand
Strand 2
Q
108 109parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
462 463first strand
Strand 2
C
725 726anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
739 742first strand
Strand 2
C
752 756anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
462 463first strand
Strand 2
E
725 726anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
739 741first strand
Strand 2
E
753 756anti-parallel
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