Analysis of interatomic Contacts of Structural Units in PDB entry:
8CSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CSX entry

There are 3 chains in PDB entry 8CSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
K
 SER 2PHE 417
L
 MET 1ARG 409
Q
 MET 1ARG 409
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8CSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
K
11 31Right-handed alpha
Helix 2
AA2
K
43 60Right-handed alpha
Helix 3
AA3
K
60 66Right-handed alpha
Helix 4
AA4
K
72 99Right-handed alpha
Helix 5
AA5
K
109 128Right-handed alpha
Helix 6
AA6
K
135 162Right-handed alpha
Helix 7
AA7
K
166 170Right-handed 310
Helix 8
AA8
K
171 187Right-handed alpha
Helix 9
AA9
K
202 225Right-handed alpha
Helix 10
AB1
K
230 256Right-handed alpha
Helix 11
AB2
K
266 274Right-handed alpha
Helix 12
AB3
K
275 282Right-handed alpha
Helix 13
AB4
K
290 312Right-handed alpha
Helix 14
AB5
K
326 350Right-handed alpha
Helix 15
AB6
K
361 389Right-handed alpha
Helix 16
AB7
K
390 394Right-handed 310
Helix 17
AB8
K
397 401Right-handed 310
Helix 18
AB9
K
403 407Right-handed 310
Helix 19
AC1
L
3 23Right-handed alpha
Helix 20
AC2
L
50 63Right-handed alpha
Helix 21
AC3
L
63 69Right-handed alpha
Helix 22
AC4
L
75 104Right-handed alpha
Helix 23
AC5
L
111 133Right-handed alpha
Helix 24
AC6
L
137 162Right-handed alpha
Helix 25
AC7
L
174 189Right-handed alpha
Helix 26
AC8
L
191 195Right-handed 310
Helix 27
AC9
L
204 228Right-handed alpha
Helix 28
AD1
L
233 261Right-handed alpha
Helix 29
AD2
L
262 266Right-handed 310
Helix 30
AD3
L
268 275Right-handed alpha
Helix 31
AD4
L
277 283Right-handed alpha
Helix 32
AD5
L
291 321Right-handed alpha
Helix 33
AD6
L
329 334Right-handed alpha
Helix 34
AD7
L
334 351Right-handed alpha
Helix 35
AD8
L
357 384Right-handed alpha
Helix 36
AD9
L
398 402Right-handed 310
Helix 37
AE1
Q
3 23Right-handed alpha
Helix 38
AE2
Q
47 63Right-handed alpha
Helix 39
AE3
Q
63 69Right-handed alpha
Helix 40
AE4
Q
70 72Right-handed 310
Helix 41
AE5
Q
75 104Right-handed alpha
Helix 42
AE6
Q
111 133Right-handed alpha
Helix 43
AE7
Q
137 162Right-handed alpha
Helix 44
AE8
Q
174 189Right-handed alpha
Helix 45
AE9
Q
191 195Right-handed 310
Helix 46
AF1
Q
204 228Right-handed alpha
Helix 47
AF2
Q
233 262Right-handed alpha
Helix 48
AF3
Q
263 266Right-handed 310
Helix 49
AF4
Q
268 275Right-handed alpha
Helix 50
AF5
Q
277 283Right-handed alpha
Helix 51
AF6
Q
292 321Right-handed alpha
Helix 52
AF7
Q
329 334Right-handed alpha
Helix 53
AF8
Q
335 351Right-handed alpha
Helix 54
AF9
Q
357 385Right-handed alpha
Helix 55
AG1
Q
398 402Right-handed 310
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There are 3 sheets in PDB entry 8CSX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
32 34first strand
Strand 2
K
106 108parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
24 25first strand
Strand 2
L
108 109parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
24 25first strand
Strand 2
Q
108 109parallel
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