Analysis of interatomic Contacts of Structural Units in PDB entry:
8CT0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CT0 entry

There are 8 chains in PDB entry 8CT0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5TRP 174
B
 PRO 5PRO 175
C
 PRO 5VAL 176
D
 PRO 5VAL 176
E
 GLU 4TRP 174
F
 PRO 2VAL 176
G
 GLU 4PRO 175
H
 MET 1GLU 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 8CT0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 27Right-handed alpha
Helix 2
AA2
A
71 81Right-handed alpha
Helix 3
AA3
A
92 101Right-handed alpha
Helix 4
AA4
B
18 27Right-handed alpha
Helix 5
AA5
B
71 81Right-handed alpha
Helix 6
AA6
B
92 99Right-handed alpha
Helix 7
AA7
C
18 27Right-handed alpha
Helix 8
AA8
C
71 81Right-handed alpha
Helix 9
AA9
C
92 99Right-handed alpha
Helix 10
AB1
C
123 125Right-handed 310
Helix 11
AB2
D
18 27Right-handed alpha
Helix 12
AB3
D
71 81Right-handed alpha
Helix 13
AB4
D
92 99Right-handed alpha
Helix 14
AB5
D
123 125Right-handed 310
Helix 15
AB6
E
18 27Right-handed alpha
Helix 16
AB7
E
71 81Right-handed alpha
Helix 17
AB8
E
92 101Right-handed alpha
Helix 18
AB9
F
18 27Right-handed alpha
Helix 19
AC1
F
71 81Right-handed alpha
Helix 20
AC2
F
92 99Right-handed alpha
Helix 21
AC3
F
123 125Right-handed 310
Helix 22
AC4
G
18 27Right-handed alpha
Helix 23
AC5
G
71 81Right-handed alpha
Helix 24
AC6
G
92 101Right-handed alpha
Helix 25
AC7
G
123 125Right-handed 310
Helix 26
AC8
H
18 27Right-handed alpha
Helix 27
AC9
H
71 81Right-handed alpha
Helix 28
AD1
H
92 99Right-handed alpha
Helix 29
AD2
H
123 125Right-handed 310
Back to top of page

There are 30 sheets in PDB entry 8CT0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
127 141parallel
Strand 3
A
82 88anti-parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
45 50anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
127 141parallel
Strand 3
A
144 156anti-parallel
Strand 4
A
62 68anti-parallel
Strand 5
A
53 57anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
165 167anti-parallel
Strand 3
A
170 172anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 114first strand
Strand 2
A
121 123anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 7first strand
Strand 2
B
127 141parallel
Strand 3
B
82 88anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
45 50anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 7first strand
Strand 2
B
127 141parallel
Strand 3
B
144 156anti-parallel
Strand 4
B
62 68anti-parallel
Strand 5
B
53 57anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 32first strand
Strand 2
B
165 167anti-parallel
Strand 3
B
170 171anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 114first strand
Strand 2
B
121 122anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 7first strand
Strand 2
C
127 141parallel
Strand 3
C
82 88anti-parallel
Strand 4
C
34 39anti-parallel
Strand 5
C
45 50anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 7first strand
Strand 2
C
127 141parallel
Strand 3
C
144 156anti-parallel
Strand 4
C
62 68anti-parallel
Strand 5
C
53 57anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 32first strand
Strand 2
C
165 167anti-parallel
Strand 3
C
170 172anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
113 114first strand
Strand 2
C
121 122anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 7first strand
Strand 2
D
127 141parallel
Strand 3
D
82 88anti-parallel
Strand 4
D
34 39anti-parallel
Strand 5
D
45 50anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 7first strand
Strand 2
D
127 141parallel
Strand 3
D
144 156anti-parallel
Strand 4
D
62 68anti-parallel
Strand 5
D
53 57anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
31 32first strand
Strand 2
D
165 166anti-parallel
Strand 3
D
171 172anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
113 114first strand
Strand 2
D
121 122anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
31 32first strand
Strand 2
E
165 167anti-parallel
Strand 3
E
170 172anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
45 50first strand
Strand 2
E
34 39anti-parallel
Strand 3
E
82 88anti-parallel
Strand 4
E
127 141anti-parallel
Strand 5
E
144 154anti-parallel
Strand 6
E
62 68anti-parallel
Strand 7
E
53 57anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
112 114first strand
Strand 2
E
121 123anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
31 32first strand
Strand 2
F
165 167anti-parallel
Strand 3
F
170 172anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
45 50first strand
Strand 2
F
34 39anti-parallel
Strand 3
F
82 88anti-parallel
Strand 4
F
127 141anti-parallel
Strand 5
F
144 156anti-parallel
Strand 6
F
62 68anti-parallel
Strand 7
F
53 57anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
113 114first strand
Strand 2
F
121 122anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
6 7first strand
Strand 2
G
127 141parallel
Strand 3
G
82 88anti-parallel
Strand 4
G
34 39anti-parallel
Strand 5
G
45 50anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
6 7first strand
Strand 2
G
127 141parallel
Strand 3
G
144 156anti-parallel
Strand 4
G
62 68anti-parallel
Strand 5
G
53 57anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
31 32first strand
Strand 2
G
165 167anti-parallel
Strand 3
G
170 171anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
113 114first strand
Strand 2
G
121 122anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
6 7first strand
Strand 2
H
127 141parallel
Strand 3
H
82 88anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 50anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
6 7first strand
Strand 2
H
127 141parallel
Strand 3
H
144 156anti-parallel
Strand 4
H
62 68anti-parallel
Strand 5
H
53 57anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
31 32first strand
Strand 2
H
164 167anti-parallel
Strand 3
H
170 173anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
113 114first strand
Strand 2
H
121 122anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il