Analysis of interatomic Contacts of Structural Units in PDB entry:
8CV3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CV3 entry

There is 1 chain in PDB entry 8CV3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 14SER 477
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 8CV3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 42Right-handed alpha
Helix 2
AA2
A
45 53Right-handed alpha
Helix 3
AA3
A
53 82Right-handed alpha
Helix 4
AA4
A
86 117Right-handed alpha
Helix 5
AA5
A
138 148Right-handed alpha
Helix 6
AA6
A
153 158Right-handed alpha
Helix 7
AA7
A
211 230Right-handed alpha
Helix 8
AA8
A
233 273Right-handed alpha
Helix 9
AA9
A
277 282Right-handed alpha
Helix 10
AB1
A
282 299Right-handed alpha
Helix 11
AB2
A
299 309Right-handed alpha
Helix 12
AB3
A
312 320Right-handed alpha
Helix 13
AB4
A
320 331Right-handed alpha
Helix 14
AB5
A
333 335Right-handed 310
Helix 15
AB6
A
336 347Right-handed alpha
Helix 16
AB7
A
351 366Right-handed alpha
Helix 17
AB8
A
367 385Right-handed alpha
Helix 18
AB9
A
390 404Right-handed alpha
Helix 19
AC1
A
416 427Right-handed alpha
Helix 20
AC2
A
429 431Right-handed 310
Helix 21
AC3
A
432 437Right-handed alpha
Helix 22
AC4
A
439 466Right-handed alpha
Helix 23
AC5
A
466 476Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 8CV3.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 167first strand
Strand 2
A
201 208anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il