Analysis of interatomic Contacts of Structural Units in PDB entry:
8CV5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CV5 entry

There are 4 chains in PDB entry 8CV5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 307GLU 418
B
 TRP 1ARG 8
B
 TYR 10GLY 11
B
 LYS 14CYS 17
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 8CV5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
309 323Right-handed alpha
Helix 2
AA2
A
324 326Right-handed 310
Helix 3
AA3
A
327 332Right-handed alpha
Helix 4
AA4
A
333 335Right-handed 310
Helix 5
AA5
A
339 344Right-handed alpha
Helix 6
AA6
A
347 352Right-handed alpha
Helix 7
AA7
A
357 367Right-handed alpha
Helix 8
AA8
A
372 391Right-handed alpha
Helix 9
AA9
A
395 415Right-handed alpha
Helix 10
AB1
B
3 11Right-handed alpha
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There are no sheets in PDB entry 8CV5
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il