Analysis of interatomic Contacts of Structural Units in PDB entry:
8CVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CVX entry

There are 8 chains in PDB entry 8CVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 24PRO 625
E
 SER 318GLN 350
H
 SER 318GLN 350
G
 SER 318LEU 349
F
 SER 318LEU 349
B
 ASP 23PRO 625
D
 ASP 23PRO 625
C
 ASP 23PRO 625
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are101 helices in PDB entry 8CVX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 58Right-handed alpha
Helix 2
AA2
A
69 76Right-handed alpha
Helix 3
AA3
A
84 96Right-handed alpha
Helix 4
AA4
A
121 137Right-handed alpha
Helix 5
AA5
A
145 169Right-handed alpha
Helix 6
AA6
A
182 184Right-handed 310
Helix 7
AA7
A
185 194Right-handed alpha
Helix 8
AA8
A
207 217Right-handed alpha
Helix 9
AA9
A
230 236Right-handed alpha
Helix 10
AB1
A
238 249Right-handed alpha
Helix 11
AB2
A
259 269Right-handed alpha
Helix 12
AB3
A
291 312Right-handed alpha
Helix 13
AB4
A
338 353Right-handed alpha
Helix 14
AB5
A
376 409Right-handed alpha
Helix 15
AB6
A
421 436Right-handed alpha
Helix 16
AB7
A
454 464Right-handed alpha
Helix 17
AB8
A
492 500Right-handed alpha
Helix 18
AB9
A
513 522Right-handed alpha
Helix 19
AC1
A
532 541Right-handed alpha
Helix 20
AC2
A
559 576Right-handed alpha
Helix 21
AC3
A
578 591Right-handed alpha
Helix 22
AC4
A
597 602Right-handed alpha
Helix 23
AC5
A
602 617Right-handed alpha
Helix 24
AC6
E
319 326Right-handed alpha
Helix 25
AC7
E
337 350Right-handed alpha
Helix 26
AC8
H
319 326Right-handed alpha
Helix 27
AC9
H
327 329Right-handed 310
Helix 28
AD1
H
337 348Right-handed alpha
Helix 29
AD2
G
319 326Right-handed alpha
Helix 30
AD3
G
327 329Right-handed 310
Helix 31
AD4
G
337 348Right-handed alpha
Helix 32
AD5
F
320 326Right-handed alpha
Helix 33
AD6
F
327 329Right-handed 310
Helix 34
AD7
F
337 346Right-handed alpha
Helix 35
AD8
B
42 58Right-handed alpha
Helix 36
AD9
B
69 76Right-handed alpha
Helix 37
AE1
B
84 96Right-handed alpha
Helix 38
AE2
B
97 99Right-handed 310
Helix 39
AE3
B
125 137Right-handed alpha
Helix 40
AE4
B
145 169Right-handed alpha
Helix 41
AE5
B
181 194Right-handed alpha
Helix 42
AE6
B
207 217Right-handed alpha
Helix 43
AE7
B
230 236Right-handed alpha
Helix 44
AE8
B
238 249Right-handed alpha
Helix 45
AE9
B
259 267Right-handed alpha
Helix 46
AF1
B
291 312Right-handed alpha
Helix 47
AF2
B
338 353Right-handed alpha
Helix 48
AF3
B
376 409Right-handed alpha
Helix 49
AF4
B
421 436Right-handed alpha
Helix 50
AF5
B
454 464Right-handed alpha
Helix 51
AF6
B
492 500Right-handed alpha
Helix 52
AF7
B
514 522Right-handed alpha
Helix 53
AF8
B
532 541Right-handed alpha
Helix 54
AF9
B
559 576Right-handed alpha
Helix 55
AG1
B
578 591Right-handed alpha
Helix 56
AG2
B
597 617Right-handed alpha
Helix 57
AG3
D
42 58Right-handed alpha
Helix 58
AG4
D
69 76Right-handed alpha
Helix 59
AG5
D
84 96Right-handed alpha
Helix 60
AG6
D
97 99Right-handed 310
Helix 61
AG7
D
125 135Right-handed alpha
Helix 62
AG8
D
145 169Right-handed alpha
Helix 63
AG9
D
181 195Right-handed alpha
Helix 64
AH1
D
207 217Right-handed alpha
Helix 65
AH2
D
230 236Right-handed alpha
Helix 66
AH3
D
238 251Right-handed alpha
Helix 67
AH4
D
259 269Right-handed alpha
Helix 68
AH5
D
291 312Right-handed alpha
Helix 69
AH6
D
338 353Right-handed alpha
Helix 70
AH7
D
376 409Right-handed alpha
Helix 71
AH8
D
421 436Right-handed alpha
Helix 72
AH9
D
454 464Right-handed alpha
Helix 73
AI1
D
492 500Right-handed alpha
Helix 74
AI2
D
514 522Right-handed alpha
Helix 75
AI3
D
532 541Right-handed alpha
Helix 76
AI4
D
559 576Right-handed alpha
Helix 77
AI5
D
578 591Right-handed alpha
Helix 78
AI6
D
597 617Right-handed alpha
Helix 79
AI7
C
42 51Right-handed alpha
Helix 80
AI8
C
53 58Right-handed alpha
Helix 81
AI9
C
69 76Right-handed alpha
Helix 82
AJ1
C
84 97Right-handed alpha
Helix 83
AJ2
C
124 135Right-handed alpha
Helix 84
AJ3
C
145 169Right-handed alpha
Helix 85
AJ4
C
181 194Right-handed alpha
Helix 86
AJ5
C
207 217Right-handed alpha
Helix 87
AJ6
C
230 236Right-handed alpha
Helix 88
AJ7
C
238 249Right-handed alpha
Helix 89
AJ8
C
259 269Right-handed alpha
Helix 90
AJ9
C
291 312Right-handed alpha
Helix 91
AK1
C
338 353Right-handed alpha
Helix 92
AK2
C
376 409Right-handed alpha
Helix 93
AK3
C
421 435Right-handed alpha
Helix 94
AK4
C
454 464Right-handed alpha
Helix 95
AK5
C
492 500Right-handed alpha
Helix 96
AK6
C
514 522Right-handed alpha
Helix 97
AK7
C
532 541Right-handed alpha
Helix 98
AK8
C
559 576Right-handed alpha
Helix 99
AK9
C
578 591Right-handed alpha
Helix 100
AL1
C
597 602Right-handed alpha
Helix 101
AL2
C
602 617Right-handed alpha
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There are 12 sheets in PDB entry 8CVX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
101 106anti-parallel
Strand 3
A
113 117anti-parallel
Strand 4
A
63 67parallel
Strand 5
A
30 33parallel
Strand 6
A
175 180parallel
Strand 7
A
198 204parallel
Strand 8
A
254 257parallel
Strand 9
A
276 277parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 477first strand
Strand 2
A
361 367parallel
Strand 3
A
323 329parallel
Strand 4
A
502 504parallel
Strand 5
A
526 529parallel
Strand 6
A
552 553parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 375first strand
Strand 2
A
446 448anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 79first strand
Strand 2
B
104 106anti-parallel
Strand 3
B
113 117anti-parallel
Strand 4
B
63 67parallel
Strand 5
B
29 32parallel
Strand 6
B
175 180parallel
Strand 7
B
198 204parallel
Strand 8
B
254 257parallel
Strand 9
B
276 277parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 477first strand
Strand 2
B
361 367parallel
Strand 3
B
323 329parallel
Strand 4
B
502 504parallel
Strand 5
B
526 529parallel
Strand 6
B
552 553parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 375first strand
Strand 2
B
446 448anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 79first strand
Strand 2
D
104 106anti-parallel
Strand 3
D
113 118anti-parallel
Strand 4
D
63 68parallel
Strand 5
D
29 33parallel
Strand 6
D
175 180parallel
Strand 7
D
198 204parallel
Strand 8
D
254 257parallel
Strand 9
D
276 277parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
473 475first strand
Strand 2
D
361 367parallel
Strand 3
D
323 329parallel
Strand 4
D
502 504parallel
Strand 5
D
526 529parallel
Strand 6
D
552 553parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
374 375first strand
Strand 2
D
446 447anti-parallel
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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 79first strand
Strand 2
C
101 106anti-parallel
Strand 3
C
113 118anti-parallel
Strand 4
C
63 68parallel
Strand 5
C
27 33parallel
Strand 6
C
174 180parallel
Strand 7
C
198 204parallel
Strand 8
C
254 257parallel
Strand 9
C
276 277parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
473 477first strand
Strand 2
C
361 367parallel
Strand 3
C
323 329parallel
Strand 4
C
502 504parallel
Strand 5
C
526 529parallel
Strand 6
C
552 553parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
372 375first strand
Strand 2
C
446 448anti-parallel
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