Analysis of interatomic Contacts of Structural Units in PDB entry:
8CVY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CVY entry

There are 7 chains in PDB entry 8CVY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 22ASN 626
E
 VAL 316TYR 348
C
 PHE 22ASN 626
G
 VAL 316LEU 349
D
 PHE 22ASN 626
H
 VAL 316LEU 349
B
 GLU 292LEU 601
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 92 helices in PDB entry 8CVY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 59Right-handed alpha
Helix 2
AA2
A
69 76Right-handed alpha
Helix 3
AA3
A
84 97Right-handed alpha
Helix 4
AA4
A
128 138Right-handed alpha
Helix 5
AA5
A
146 169Right-handed alpha
Helix 6
AA6
A
181 183Right-handed 310
Helix 7
AA7
A
184 194Right-handed alpha
Helix 8
AA8
A
207 217Right-handed alpha
Helix 9
AA9
A
228 236Right-handed alpha
Helix 10
AB1
A
238 252Right-handed alpha
Helix 11
AB2
A
259 270Right-handed alpha
Helix 12
AB3
A
292 312Right-handed alpha
Helix 13
AB4
A
338 356Right-handed alpha
Helix 14
AB5
A
376 411Right-handed alpha
Helix 15
AB6
A
415 420Right-handed alpha
Helix 16
AB7
A
421 435Right-handed alpha
Helix 17
AB8
A
454 464Right-handed alpha
Helix 18
AB9
A
492 500Right-handed alpha
Helix 19
AC1
A
513 523Right-handed alpha
Helix 20
AC2
A
532 542Right-handed alpha
Helix 21
AC3
A
559 576Right-handed alpha
Helix 22
AC4
A
578 590Right-handed alpha
Helix 23
AC5
A
592 597Right-handed alpha
Helix 24
AC6
A
597 616Right-handed alpha
Helix 25
AC7
E
317 328Right-handed alpha
Helix 26
AC8
E
337 347Right-handed alpha
Helix 27
AC9
C
42 59Right-handed alpha
Helix 28
AD1
C
69 76Right-handed alpha
Helix 29
AD2
C
84 97Right-handed alpha
Helix 30
AD3
C
128 136Right-handed alpha
Helix 31
AD4
C
145 169Right-handed alpha
Helix 32
AD5
C
181 194Right-handed alpha
Helix 33
AD6
C
207 217Right-handed alpha
Helix 34
AD7
C
228 236Right-handed alpha
Helix 35
AD8
C
238 252Right-handed alpha
Helix 36
AD9
C
259 270Right-handed alpha
Helix 37
AE1
C
283 288Right-handed 310
Helix 38
AE2
C
289 291Right-handed 310
Helix 39
AE3
C
292 312Right-handed alpha
Helix 40
AE4
C
338 356Right-handed alpha
Helix 41
AE5
C
376 411Right-handed alpha
Helix 42
AE6
C
415 420Right-handed alpha
Helix 43
AE7
C
421 435Right-handed alpha
Helix 44
AE8
C
454 464Right-handed alpha
Helix 45
AE9
C
492 500Right-handed alpha
Helix 46
AF1
C
513 523Right-handed alpha
Helix 47
AF2
C
532 542Right-handed alpha
Helix 48
AF3
C
559 577Right-handed alpha
Helix 49
AF4
C
578 592Right-handed alpha
Helix 50
AF5
C
592 597Right-handed alpha
Helix 51
AF6
C
597 616Right-handed alpha
Helix 52
AF7
G
317 328Right-handed alpha
Helix 53
AF8
G
337 348Right-handed alpha
Helix 54
AF9
D
42 59Right-handed alpha
Helix 55
AG1
D
69 76Right-handed alpha
Helix 56
AG2
D
84 97Right-handed alpha
Helix 57
AG3
D
119 126Right-handed 310
Helix 58
AG4
D
128 138Right-handed alpha
Helix 59
AG5
D
146 169Right-handed alpha
Helix 60
AG6
D
184 194Right-handed alpha
Helix 61
AG7
D
207 217Right-handed alpha
Helix 62
AG8
D
228 236Right-handed alpha
Helix 63
AG9
D
238 252Right-handed alpha
Helix 64
AH1
D
259 270Right-handed alpha
Helix 65
AH2
D
283 287Right-handed 310
Helix 66
AH3
D
292 312Right-handed alpha
Helix 67
AH4
D
338 356Right-handed alpha
Helix 68
AH5
D
376 411Right-handed alpha
Helix 69
AH6
D
415 420Right-handed alpha
Helix 70
AH7
D
421 435Right-handed alpha
Helix 71
AH8
D
454 464Right-handed alpha
Helix 72
AH9
D
492 500Right-handed alpha
Helix 73
AI1
D
513 523Right-handed alpha
Helix 74
AI2
D
532 542Right-handed alpha
Helix 75
AI3
D
559 576Right-handed alpha
Helix 76
AI4
D
578 590Right-handed alpha
Helix 77
AI5
D
592 597Right-handed alpha
Helix 78
AI6
D
597 616Right-handed alpha
Helix 79
AI7
H
317 328Right-handed alpha
Helix 80
AI8
H
337 348Right-handed alpha
Helix 81
AI9
B
293 312Right-handed alpha
Helix 82
AJ1
B
338 356Right-handed alpha
Helix 83
AJ2
B
376 411Right-handed alpha
Helix 84
AJ3
B
415 420Right-handed alpha
Helix 85
AJ4
B
421 435Right-handed alpha
Helix 86
AJ5
B
454 464Right-handed alpha
Helix 87
AJ6
B
492 500Right-handed alpha
Helix 88
AJ7
B
513 523Right-handed alpha
Helix 89
AJ8
B
532 542Right-handed alpha
Helix 90
AJ9
B
559 576Right-handed alpha
Helix 91
AK1
B
578 590Right-handed alpha
Helix 92
AK2
B
592 597Right-handed alpha
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There are 12 sheets in PDB entry 8CVY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
101 106anti-parallel
Strand 3
A
113 117anti-parallel
Strand 4
A
62 67parallel
Strand 5
A
29 32parallel
Strand 6
A
176 179parallel
Strand 7
A
199 204parallel
Strand 8
A
254 257parallel
Strand 9
A
276 277parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 477first strand
Strand 2
A
362 367parallel
Strand 3
A
324 329parallel
Strand 4
A
502 504parallel
Strand 5
A
526 529parallel
Strand 6
A
552 553parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 375first strand
Strand 2
A
446 448anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 79first strand
Strand 2
C
102 106anti-parallel
Strand 3
C
113 117anti-parallel
Strand 4
C
62 67parallel
Strand 5
C
29 32parallel
Strand 6
C
176 179parallel
Strand 7
C
199 204parallel
Strand 8
C
254 257parallel
Strand 9
C
276 277parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
473 477first strand
Strand 2
C
362 367parallel
Strand 3
C
324 329parallel
Strand 4
C
502 504parallel
Strand 5
C
526 529parallel
Strand 6
C
552 553parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
372 375first strand
Strand 2
C
446 448anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
62 63first strand
Strand 2
D
29 32parallel
Strand 3
D
176 179parallel
Strand 4
D
199 204parallel
Strand 5
D
254 257parallel
Strand 6
D
276 277parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
66 67first strand
Strand 2
D
113 117parallel
Strand 3
D
102 105anti-parallel
Strand 4
D
78 79anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
473 478first strand
Strand 2
D
362 367parallel
Strand 3
D
324 329parallel
Strand 4
D
502 504parallel
Strand 5
D
526 529parallel
Strand 6
D
552 553parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
372 375first strand
Strand 2
D
446 448anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 477first strand
Strand 2
B
362 367parallel
Strand 3
B
324 329parallel
Strand 4
B
502 504parallel
Strand 5
B
526 529parallel
Strand 6
B
552 553parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 375first strand
Strand 2
B
446 448anti-parallel
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