Analysis of interatomic Contacts of Structural Units in PDB entry:
8CWT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CWT entry

There are 6 chains in PDB entry 8CWT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 15LYS 89
B
 ALA 439GLY 546
C
 TRP 15LYS 89
D
 ALA 439GLY 546
E
 ILE 14LYS 89
F
 ALA 439GLY 546
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 8CWT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 21Right-handed 310
Helix 2
AA2
A
27 31Right-handed 310
Helix 3
AA3
A
38 54Right-handed alpha
Helix 4
AA4
A
58 70Right-handed alpha
Helix 5
AA5
A
80 89Right-handed alpha
Helix 6
AA6
B
457 466Right-handed alpha
Helix 7
AA7
B
468 480Right-handed alpha
Helix 8
AA8
B
488 497Right-handed alpha
Helix 9
AA9
B
499 516Right-handed alpha
Helix 10
AB1
B
520 528Right-handed alpha
Helix 11
AB2
B
529 532Right-handed 310
Helix 12
AB3
B
535 546Right-handed alpha
Helix 13
AB4
C
15 21Right-handed 310
Helix 14
AB5
C
27 31Right-handed 310
Helix 15
AB6
C
38 54Right-handed alpha
Helix 16
AB7
C
58 70Right-handed alpha
Helix 17
AB8
C
80 89Right-handed alpha
Helix 18
AB9
D
457 466Right-handed alpha
Helix 19
AC1
D
468 480Right-handed alpha
Helix 20
AC2
D
488 497Right-handed alpha
Helix 21
AC3
D
499 516Right-handed alpha
Helix 22
AC4
D
519 528Right-handed alpha
Helix 23
AC5
D
529 532Right-handed 310
Helix 24
AC6
D
535 546Right-handed alpha
Helix 25
AC7
E
16 21Right-handed 310
Helix 26
AC8
E
27 31Right-handed 310
Helix 27
AC9
E
38 54Right-handed alpha
Helix 28
AD1
E
58 70Right-handed alpha
Helix 29
AD2
E
80 89Right-handed alpha
Helix 30
AD3
F
457 466Right-handed alpha
Helix 31
AD4
F
468 480Right-handed alpha
Helix 32
AD5
F
488 497Right-handed alpha
Helix 33
AD6
F
499 516Right-handed alpha
Helix 34
AD7
F
519 528Right-handed alpha
Helix 35
AD8
F
529 532Right-handed 310
Helix 36
AD9
F
535 546Right-handed alpha
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There are 3 sheets in PDB entry 8CWT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
443 448first strand
Strand 2
B
451 456anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
443 448first strand
Strand 2
D
451 456anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
443 448first strand
Strand 2
F
451 456anti-parallel
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