Analysis of interatomic Contacts of Structural Units in PDB entry:
8CWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CWZ entry

There are 2 chains in PDB entry 8CWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3PRO 137
B
 LYS 0THR 202
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8CWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 16Right-handed alpha
Helix 2
AA2
A
19 34Right-handed alpha
Helix 3
AA3
A
37 52Right-handed alpha
Helix 4
AA4
A
53 68Right-handed alpha
Helix 5
AA5
A
71 86Right-handed alpha
Helix 6
AA6
A
89 100Right-handed alpha
Helix 7
AA7
A
105 118Right-handed alpha
Helix 8
AA8
A
121 130Right-handed alpha
Helix 9
AA9
B
1 8Right-handed alpha
Helix 10
AB1
B
19 32Right-handed alpha
Helix 11
AB2
B
45 53Right-handed alpha
Helix 12
AB3
B
54 60Right-handed alpha
Helix 13
AB4
B
77 81Right-handed 310
Helix 14
AB5
B
92 102Right-handed alpha
Helix 15
AB6
B
111 120Right-handed alpha
Helix 16
AB7
B
130 135Right-handed alpha
Helix 17
AB8
B
136 144Right-handed alpha
Helix 18
AB9
B
161 170Right-handed alpha
Helix 19
AC1
B
176 181Right-handed alpha
Helix 20
AC2
B
185 200Right-handed alpha
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There are 3 sheets in PDB entry 8CWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 65first strand
Strand 2
B
36 39parallel
Strand 3
B
10 14parallel
Strand 4
B
173 175parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 86first strand
Strand 2
B
104 106parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 109first strand
Strand 2
B
125 128parallel
Strand 3
B
150 153parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il