Analysis of interatomic Contacts of Structural Units in PDB entry:
8CYR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CYR entry

There are 12 chains in PDB entry 8CYR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 15LYS 97
B
 VAL 15LYS 97
C
 VAL 15LYS 97
D
 VAL 15LYS 97
E
 VAL 15LYS 97
F
 VAL 15LYS 97
I
 VAL 15LYS 97
J
 VAL 15LYS 97
K
 VAL 15LYS 97
L
 VAL 15LYS 97
M
 VAL 15LYS 97
N
 VAL 15LYS 97
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 8CYR

There are 18 sheets in PDB entry 8CYR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 18first strand
Strand 2
E
16 18parallel
Strand 3
A
16 18parallel
Strand 4
I
16 18parallel
Strand 5
K
16 18parallel
Strand 6
M
16 18parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
21 23first strand
Strand 2
E
21 23parallel
Strand 3
A
21 23parallel
Strand 4
I
21 23parallel
Strand 5
K
21 23parallel
Strand 6
M
21 23parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 45first strand
Strand 2
E
37 45parallel
Strand 3
A
37 45parallel
Strand 4
I
37 45parallel
Strand 5
K
37 45parallel
Strand 6
M
37 45parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 50first strand
Strand 2
E
48 50parallel
Strand 3
A
48 50parallel
Strand 4
I
48 50parallel
Strand 5
K
48 50parallel
Strand 6
M
48 50parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 55first strand
Strand 2
E
53 55parallel
Strand 3
A
53 55parallel
Strand 4
I
53 55parallel
Strand 5
K
53 55parallel
Strand 6
M
53 55parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
63 66first strand
Strand 2
E
63 66parallel
Strand 3
A
63 66parallel
Strand 4
I
63 66parallel
Strand 5
K
63 66parallel
Strand 6
M
63 66parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
71 72first strand
Strand 2
E
71 72parallel
Strand 3
A
71 72parallel
Strand 4
I
71 72parallel
Strand 5
K
71 72parallel
Strand 6
M
71 72parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
75 77first strand
Strand 2
E
75 77parallel
Strand 3
A
75 77parallel
Strand 4
I
75 77parallel
Strand 5
K
75 77parallel
Strand 6
M
75 77parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
86 88first strand
Strand 2
E
86 88parallel
Strand 3
A
86 88parallel
Strand 4
I
86 88parallel
Strand 5
K
86 88parallel
Strand 6
M
86 88parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 18first strand
Strand 2
F
16 18parallel
Strand 3
B
16 18parallel
Strand 4
J
16 18parallel
Strand 5
L
16 18parallel
Strand 6
N
16 18parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
21 23first strand
Strand 2
F
21 23parallel
Strand 3
B
21 23parallel
Strand 4
J
21 23parallel
Strand 5
L
21 23parallel
Strand 6
N
21 23parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
37 45first strand
Strand 2
F
37 45parallel
Strand 3
B
37 45parallel
Strand 4
J
37 45parallel
Strand 5
L
37 45parallel
Strand 6
N
37 45parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 50first strand
Strand 2
F
48 50parallel
Strand 3
B
48 50parallel
Strand 4
J
48 50parallel
Strand 5
L
48 50parallel
Strand 6
N
48 50parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 55first strand
Strand 2
F
53 55parallel
Strand 3
B
53 55parallel
Strand 4
J
53 55parallel
Strand 5
L
53 55parallel
Strand 6
N
53 55parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 66first strand
Strand 2
F
61 66parallel
Strand 3
B
61 66parallel
Strand 4
J
61 66parallel
Strand 5
L
61 66parallel
Strand 6
N
61 66parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
71 72first strand
Strand 2
F
71 72parallel
Strand 3
B
71 72parallel
Strand 4
J
71 72parallel
Strand 5
L
71 72parallel
Strand 6
N
71 72parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
75 77first strand
Strand 2
F
75 77parallel
Strand 3
B
75 77parallel
Strand 4
J
75 77parallel
Strand 5
L
75 77parallel
Strand 6
N
75 77parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
86 88first strand
Strand 2
F
86 88parallel
Strand 3
B
86 88parallel
Strand 4
J
86 88parallel
Strand 5
L
86 88parallel
Strand 6
N
86 88parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il