Analysis of interatomic Contacts of Structural Units in PDB entry:
8CZ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CZ5 entry

There are 3 chains in PDB entry 8CZ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 237LEU 569
H
 GLN 1ARG 222
L
 GLU 1GLU 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8CZ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
238 243Right-handed 310
Helix 2
AA2
A
244 249Right-handed alpha
Helix 3
AA3
A
369 373Right-handed 310
Helix 4
AA4
A
439 443Right-handed 310
Helix 5
AA5
A
491 499Right-handed alpha
Helix 6
AA6
H
28 32Right-handed 310
Helix 7
AA7
H
62 65Right-handed 310
Helix 8
AA8
H
74 76Right-handed 310
Helix 9
AA9
H
87 91Right-handed 310
Helix 10
AB1
H
195 197Right-handed 310
Helix 11
AB2
H
209 212Right-handed 310
Helix 12
AB3
L
79 83Right-handed 310
Helix 13
AB4
L
121 126Right-handed alpha
Helix 14
AB5
L
183 187Right-handed alpha
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There are 15 sheets in PDB entry 8CZ5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
485 488first strand
Strand 2
A
459 466anti-parallel
Strand 3
A
534 536anti-parallel
Strand 4
A
523 528anti-parallel
Strand 5
A
511 519anti-parallel
Strand 6
A
550 560anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
545 546first strand
Strand 2
A
261 266anti-parallel
Strand 3
A
459 466anti-parallel
Strand 4
A
534 536anti-parallel
Strand 5
A
523 528anti-parallel
Strand 6
A
567 568anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 390first strand
Strand 2
A
374 382anti-parallel
Strand 3
A
354 362anti-parallel
Strand 4
A
425 426anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 390first strand
Strand 2
A
374 382anti-parallel
Strand 3
A
398 403anti-parallel
Strand 4
A
315 319anti-parallel
Strand 5
A
294 303anti-parallel
Strand 6
A
413 421anti-parallel
Strand 7
A
354 362anti-parallel
Strand 8
A
425 426anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 312first strand
Strand 2
A
407 409anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
116 120parallel
Strand 3
H
92 102anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
116 120parallel
Strand 3
H
92 102anti-parallel
Strand 4
H
105 112anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
129 133first strand
Strand 2
H
144 154anti-parallel
Strand 3
H
183 193anti-parallel
Strand 4
H
172 174anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
129 133first strand
Strand 2
H
144 154anti-parallel
Strand 3
H
183 193anti-parallel
Strand 4
H
178 180anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
160 163first strand
Strand 2
H
203 208anti-parallel
Strand 3
H
213 218anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
70 75anti-parallel
Strand 4
L
62 67anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
102 106parallel
Strand 3
L
84 90anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 49anti-parallel
Strand 6
L
53 54anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
114 118first strand
Strand 2
L
129 139anti-parallel
Strand 3
L
173 182anti-parallel
Strand 4
L
159 163anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
153 154first strand
Strand 2
L
145 150anti-parallel
Strand 3
L
191 197anti-parallel
Strand 4
L
205 210anti-parallel
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