Analysis of interatomic Contacts of Structural Units in PDB entry:
8CZJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CZJ entry

There are 2 chains in PDB entry 8CZJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5GLY 309
B
 SER 5GLY 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 8CZJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 22Right-handed alpha
Helix 2
AA2
A
22 49Right-handed alpha
Helix 3
AA3
A
56 76Right-handed alpha
Helix 4
AA4
A
77 79Right-handed 310
Helix 5
AA5
A
84 106Right-handed alpha
Helix 6
AA6
A
107 120Right-handed alpha
Helix 7
AA7
A
122 146Right-handed alpha
Helix 8
AA8
A
160 177Right-handed alpha
Helix 9
AA9
A
178 190Right-handed alpha
Helix 10
AB1
A
193 223Right-handed alpha
Helix 11
AB2
A
225 237Right-handed alpha
Helix 12
AB3
A
238 251Right-handed alpha
Helix 13
AB4
A
256 276Right-handed alpha
Helix 14
AB5
A
276 284Right-handed alpha
Helix 15
AB6
A
286 309Right-handed alpha
Helix 16
AB7
B
6 22Right-handed alpha
Helix 17
AB8
B
22 49Right-handed alpha
Helix 18
AB9
B
55 77Right-handed alpha
Helix 19
AC1
B
84 106Right-handed alpha
Helix 20
AC2
B
107 120Right-handed alpha
Helix 21
AC3
B
122 146Right-handed alpha
Helix 22
AC4
B
160 177Right-handed alpha
Helix 23
AC5
B
178 189Right-handed alpha
Helix 24
AC6
B
193 223Right-handed alpha
Helix 25
AC7
B
225 237Right-handed alpha
Helix 26
AC8
B
238 251Right-handed alpha
Helix 27
AC9
B
256 276Right-handed alpha
Helix 28
AD1
B
276 284Right-handed alpha
Helix 29
AD2
B
286 309Right-handed alpha
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There are no sheets in PDB entry 8CZJ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il