Analysis of interatomic Contacts of Structural Units in PDB entry:
8CZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8CZQ entry

There are 4 chains in PDB entry 8CZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 16THR 704
B
 C 1 C 12
C
 C 1 C 12
D
 T 2 C 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8CZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 37Right-handed alpha
Helix 2
AA2
A
55 59Right-handed 310
Helix 3
AA3
A
66 70Right-handed 310
Helix 4
AA4
A
89 101Right-handed alpha
Helix 5
AA5
A
113 128Right-handed alpha
Helix 6
AA6
A
142 151Right-handed alpha
Helix 7
AA7
A
157 186Right-handed alpha
Helix 8
AA8
A
195 212Right-handed alpha
Helix 9
AA9
A
253 257Right-handed 310
Helix 10
AB1
A
273 280Right-handed alpha
Helix 11
AB2
A
308 320Right-handed alpha
Helix 12
AB3
A
323 337Right-handed alpha
Helix 13
AB4
A
351 366Right-handed alpha
Helix 14
AB5
A
401 407Right-handed alpha
Helix 15
AB6
A
410 412Right-handed 310
Helix 16
AB7
A
413 430Right-handed alpha
Helix 17
AB8
A
466 470Right-handed 310
Helix 18
AB9
A
518 530Right-handed alpha
Helix 19
AC1
A
533 547Right-handed alpha
Helix 20
AC2
A
560 574Right-handed alpha
Helix 21
AC3
A
581 595Right-handed alpha
Helix 22
AC4
A
599 610Right-handed alpha
Helix 23
AC5
A
617 622Right-handed alpha
Helix 24
AC6
A
624 636Right-handed alpha
Helix 25
AC7
A
637 642Right-handed alpha
Helix 26
AC8
A
689 693Right-handed 310
Helix 27
AC9
A
694 704Right-handed alpha
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There are 7 sheets in PDB entry 8CZQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 44first strand
Strand 2
A
19 23parallel
Strand 3
A
105 108parallel
Strand 4
A
133 135parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
84 85anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
A
80 81anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 221first strand
Strand 2
A
506 510anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 250first strand
Strand 2
A
242 246anti-parallel
Strand 3
A
453 462anti-parallel
Strand 4
A
435 445anti-parallel
Strand 5
A
288 301anti-parallel
Strand 6
A
499 500anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
550 553first strand
Strand 2
A
556 559anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
643 648first strand
Strand 2
A
654 660anti-parallel
Strand 3
A
663 669anti-parallel
Strand 4
A
679 683anti-parallel
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