Analysis of interatomic Contacts of Structural Units in PDB entry:
8D00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8D00 entry

There is 1 chain in PDB entry 8D00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 29TYR 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 8D00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 53Right-handed alpha
Helix 2
AA2
A
59 72Right-handed alpha
Helix 3
AA3
A
77 89Right-handed alpha
Helix 4
AA4
A
93 111Right-handed alpha
Helix 5
AA5
A
111 116Right-handed alpha
Helix 6
AA6
A
118 130Right-handed alpha
Helix 7
AA7
A
134 153Right-handed alpha
Helix 8
AA8
A
163 181Right-handed alpha
Helix 9
AA9
A
184 202Right-handed alpha
Helix 10
AB1
A
206 211Right-handed alpha
Helix 11
AB2
A
213 223Right-handed alpha
Helix 12
AB3
A
228 242Right-handed alpha
Helix 13
AB4
A
246 248Right-handed 310
Helix 14
AB5
A
249 262Right-handed alpha
Helix 15
AB6
A
265 283Right-handed alpha
Helix 16
AB7
A
284 287Right-handed 310
Helix 17
AB8
A
291 302Right-handed alpha
Helix 18
AB9
A
306 325Right-handed alpha
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There are no sheets in PDB entry 8D00
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