Analysis of interatomic Contacts of Structural Units in PDB entry:
8D9X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8D9X entry

There are 8 chains in PDB entry 8D9X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 228ALA 437
B
 SER 228ALA 437
C
 SER 228ALA 437
D
 SER 228ALA 437
E
 SER 228ALA 437
F
 SER 228ALA 437
G
 SER 228ALA 437
H
 SER 228ALA 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 8D9X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
228 259Right-handed alpha
Helix 2
AA2
A
261 273Right-handed alpha
Helix 3
AA3
A
276 290Right-handed alpha
Helix 4
AA4
A
297 310Right-handed alpha
Helix 5
AA5
A
312 324Right-handed alpha
Helix 6
AA6
A
332 347Right-handed alpha
Helix 7
AA7
A
350 361Right-handed alpha
Helix 8
AA8
A
368 381Right-handed alpha
Helix 9
AA9
A
384 398Right-handed alpha
Helix 10
AB1
A
405 418Right-handed alpha
Helix 11
AB2
A
420 434Right-handed alpha
Helix 12
AB3
B
229 259Right-handed alpha
Helix 13
AB4
B
261 273Right-handed alpha
Helix 14
AB5
B
276 290Right-handed alpha
Helix 15
AB6
B
297 309Right-handed alpha
Helix 16
AB7
B
312 324Right-handed alpha
Helix 17
AB8
B
332 347Right-handed alpha
Helix 18
AB9
B
350 361Right-handed alpha
Helix 19
AC1
B
368 381Right-handed alpha
Helix 20
AC2
B
384 398Right-handed alpha
Helix 21
AC3
B
405 418Right-handed alpha
Helix 22
AC4
B
420 431Right-handed alpha
Helix 23
AC5
B
433 437Right-handed 310
Helix 24
AC6
C
229 259Right-handed alpha
Helix 25
AC7
C
261 273Right-handed alpha
Helix 26
AC8
C
276 290Right-handed alpha
Helix 27
AC9
C
297 310Right-handed alpha
Helix 28
AD1
C
312 325Right-handed alpha
Helix 29
AD2
C
332 348Right-handed alpha
Helix 30
AD3
C
350 361Right-handed alpha
Helix 31
AD4
C
368 381Right-handed alpha
Helix 32
AD5
C
384 398Right-handed alpha
Helix 33
AD6
C
405 418Right-handed alpha
Helix 34
AD7
C
420 433Right-handed alpha
Helix 35
AD8
D
229 259Right-handed alpha
Helix 36
AD9
D
261 273Right-handed alpha
Helix 37
AE1
D
276 290Right-handed alpha
Helix 38
AE2
D
297 309Right-handed alpha
Helix 39
AE3
D
312 324Right-handed alpha
Helix 40
AE4
D
332 347Right-handed alpha
Helix 41
AE5
D
350 361Right-handed alpha
Helix 42
AE6
D
368 381Right-handed alpha
Helix 43
AE7
D
384 398Right-handed alpha
Helix 44
AE8
D
405 418Right-handed alpha
Helix 45
AE9
D
422 434Right-handed alpha
Helix 46
AF1
E
229 259Right-handed alpha
Helix 47
AF2
E
261 273Right-handed alpha
Helix 48
AF3
E
276 289Right-handed alpha
Helix 49
AF4
E
297 309Right-handed alpha
Helix 50
AF5
E
312 324Right-handed alpha
Helix 51
AF6
E
332 347Right-handed alpha
Helix 52
AF7
E
350 361Right-handed alpha
Helix 53
AF8
E
368 381Right-handed alpha
Helix 54
AF9
E
384 398Right-handed alpha
Helix 55
AG1
E
405 418Right-handed alpha
Helix 56
AG2
E
422 437Right-handed alpha
Helix 57
AG3
F
229 259Right-handed alpha
Helix 58
AG4
F
261 273Right-handed alpha
Helix 59
AG5
F
276 290Right-handed alpha
Helix 60
AG6
F
297 310Right-handed alpha
Helix 61
AG7
F
312 325Right-handed alpha
Helix 62
AG8
F
332 347Right-handed alpha
Helix 63
AG9
F
350 361Right-handed alpha
Helix 64
AH1
F
368 382Right-handed alpha
Helix 65
AH2
F
384 398Right-handed alpha
Helix 66
AH3
F
405 418Right-handed alpha
Helix 67
AH4
F
420 437Right-handed alpha
Helix 68
AH5
G
229 259Right-handed alpha
Helix 69
AH6
G
261 273Right-handed alpha
Helix 70
AH7
G
276 290Right-handed alpha
Helix 71
AH8
G
297 309Right-handed alpha
Helix 72
AH9
G
312 324Right-handed alpha
Helix 73
AI1
G
332 347Right-handed alpha
Helix 74
AI2
G
350 361Right-handed alpha
Helix 75
AI3
G
368 381Right-handed alpha
Helix 76
AI4
G
384 398Right-handed alpha
Helix 77
AI5
G
405 418Right-handed alpha
Helix 78
AI6
G
420 434Right-handed alpha
Helix 79
AI7
H
229 259Right-handed alpha
Helix 80
AI8
H
261 273Right-handed alpha
Helix 81
AI9
H
276 289Right-handed alpha
Helix 82
AJ1
H
297 309Right-handed alpha
Helix 83
AJ2
H
312 324Right-handed alpha
Helix 84
AJ3
H
332 347Right-handed alpha
Helix 85
AJ4
H
350 361Right-handed alpha
Helix 86
AJ5
H
368 381Right-handed alpha
Helix 87
AJ6
H
384 398Right-handed alpha
Helix 88
AJ7
H
405 418Right-handed alpha
Helix 89
AJ8
H
422 437Right-handed alpha
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There are no sheets in PDB entry 8D9X
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