Analysis of interatomic Contacts of Structural Units in PDB entry:
8DAS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8DAS entry

There are 10 chains in PDB entry 8DAS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 33	ALA 786
B	THR 22	GLN 790
C	ASP 33	GLN 790
D	GLY 71	SER 787
E	ASN 207	SER 787
F	MET 208	GLN 790
G	ARG 107	GLY 580
H	PRO 230	GLU 310
J	MET 101	LEU 173
K	MET 201	GLY 276

There are209 helices in PDB entry 8DAS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	52	60	Right-handed alpha
Helix 2	AA2	A	95	103	Right-handed alpha
Helix 3	AA3	A	130	134	Right-handed 310
Helix 4	AA4	A	139	149	Right-handed alpha
Helix 5	AA5	A	201	205	Right-handed 310
Helix 6	AA6	A	212	216	Right-handed 310
Helix 7	AA7	A	220	236	Right-handed alpha
Helix 8	AA8	A	237	244	Right-handed alpha
Helix 9	AA9	A	260	273	Right-handed alpha
Helix 10	AB1	A	280	285	Right-handed alpha
Helix 11	AB2	A	291	305	Right-handed alpha
Helix 12	AB3	A	315	319	Right-handed 310
Helix 13	AB4	A	329	346	Right-handed alpha
Helix 14	AB5	A	359	363	Right-handed 310
Helix 15	AB6	A	364	368	Right-handed 310
Helix 16	AB7	A	383	395	Right-handed alpha
Helix 17	AB8	A	405	413	Right-handed alpha
Helix 18	AB9	A	417	437	Right-handed alpha
Helix 19	AC1	A	438	440	Right-handed 310
Helix 20	AC2	A	448	454	Right-handed alpha
Helix 21	AC3	A	458	469	Right-handed alpha
Helix 22	AC4	A	472	476	Right-handed 310
Helix 23	AC5	A	492	509	Right-handed alpha
Helix 24	AC6	A	509	517	Right-handed alpha
Helix 25	AC7	A	534	546	Right-handed alpha
Helix 26	AC8	A	553	563	Right-handed alpha
Helix 27	AC9	A	568	579	Right-handed alpha
Helix 28	AD1	A	588	592	Right-handed 310
Helix 29	AD2	A	609	620	Right-handed alpha
Helix 30	AD3	A	640	645	Right-handed 310
Helix 31	AD4	A	659	671	Right-handed alpha
Helix 32	AD5	A	672	674	Right-handed 310
Helix 33	AD6	A	682	689	Right-handed alpha
Helix 34	AD7	A	693	719	Right-handed alpha
Helix 35	AD8	A	754	764	Right-handed alpha
Helix 36	AD9	A	770	786	Right-handed alpha
Helix 37	AE1	B	97	103	Right-handed alpha
Helix 38	AE2	B	212	216	Right-handed 310
Helix 39	AE3	B	219	236	Right-handed alpha
Helix 40	AE4	B	237	244	Right-handed alpha
Helix 41	AE5	B	260	273	Right-handed alpha
Helix 42	AE6	B	280	286	Right-handed alpha
Helix 43	AE7	B	290	306	Right-handed alpha
Helix 44	AE8	B	315	319	Right-handed 310
Helix 45	AE9	B	328	346	Right-handed alpha
Helix 46	AF1	B	364	368	Right-handed 310
Helix 47	AF2	B	383	395	Right-handed alpha
Helix 48	AF3	B	405	413	Right-handed alpha
Helix 49	AF4	B	417	437	Right-handed alpha
Helix 50	AF5	B	438	440	Right-handed 310
Helix 51	AF6	B	448	453	Right-handed alpha
Helix 52	AF7	B	458	469	Right-handed alpha
Helix 53	AF8	B	472	476	Right-handed 310
Helix 54	AF9	B	492	509	Right-handed alpha
Helix 55	AG1	B	509	517	Right-handed alpha
Helix 56	AG2	B	533	545	Right-handed alpha
Helix 57	AG3	B	553	562	Right-handed alpha
Helix 58	AG4	B	568	579	Right-handed alpha
Helix 59	AG5	B	588	593	Right-handed alpha
Helix 60	AG6	B	609	620	Right-handed alpha
Helix 61	AG7	B	640	645	Right-handed 310
Helix 62	AG8	B	659	672	Right-handed alpha
Helix 63	AG9	B	682	689	Right-handed alpha
Helix 64	AH1	B	693	719	Right-handed alpha
Helix 65	AH2	B	754	765	Right-handed alpha
Helix 66	AH3	B	770	788	Right-handed alpha
Helix 67	AH4	C	52	59	Right-handed alpha
Helix 68	AH5	C	95	103	Right-handed alpha
Helix 69	AH6	C	129	134	Right-handed alpha
Helix 70	AH7	C	139	150	Right-handed alpha
Helix 71	AH8	C	201	207	Right-handed alpha
Helix 72	AH9	C	212	216	Right-handed 310
Helix 73	AI1	C	219	236	Right-handed alpha
Helix 74	AI2	C	237	244	Right-handed alpha
Helix 75	AI3	C	260	273	Right-handed alpha
Helix 76	AI4	C	280	286	Right-handed alpha
Helix 77	AI5	C	291	306	Right-handed alpha
Helix 78	AI6	C	316	319	Right-handed 310
Helix 79	AI7	C	328	345	Right-handed alpha
Helix 80	AI8	C	364	368	Right-handed 310
Helix 81	AI9	C	383	395	Right-handed alpha
Helix 82	AJ1	C	405	413	Right-handed alpha
Helix 83	AJ2	C	417	436	Right-handed alpha
Helix 84	AJ3	C	437	440	Right-handed 310
Helix 85	AJ4	C	448	455	Right-handed alpha
Helix 86	AJ5	C	458	469	Right-handed alpha
Helix 87	AJ6	C	472	476	Right-handed 310
Helix 88	AJ7	C	492	509	Right-handed alpha
Helix 89	AJ8	C	509	517	Right-handed alpha
Helix 90	AJ9	C	533	545	Right-handed alpha
Helix 91	AK1	C	553	563	Right-handed alpha
Helix 92	AK2	C	568	579	Right-handed alpha
Helix 93	AK3	C	588	592	Right-handed 310
Helix 94	AK4	C	609	621	Right-handed alpha
Helix 95	AK5	C	635	639	Right-handed 310
Helix 96	AK6	C	640	645	Right-handed 310
Helix 97	AK7	C	659	671	Right-handed alpha
Helix 98	AK8	C	682	689	Right-handed alpha
Helix 99	AK9	C	693	719	Right-handed alpha
Helix 100	AL1	C	754	764	Right-handed alpha
Helix 101	AL2	C	770	788	Right-handed alpha
Helix 102	AL3	D	97	103	Right-handed alpha
Helix 103	AL4	D	201	206	Right-handed alpha
Helix 104	AL5	D	212	216	Right-handed 310
Helix 105	AL6	D	219	236	Right-handed alpha
Helix 106	AL7	D	237	244	Right-handed alpha
Helix 107	AL8	D	260	273	Right-handed alpha
Helix 108	AL9	D	281	285	Right-handed alpha
Helix 109	AM1	D	291	306	Right-handed alpha
Helix 110	AM2	D	315	319	Right-handed 310
Helix 111	AM3	D	328	346	Right-handed alpha
Helix 112	AM4	D	364	368	Right-handed 310
Helix 113	AM5	D	383	395	Right-handed alpha
Helix 114	AM6	D	405	413	Right-handed alpha
Helix 115	AM7	D	417	437	Right-handed alpha
Helix 116	AM8	D	438	440	Right-handed 310
Helix 117	AM9	D	448	453	Right-handed alpha
Helix 118	AN1	D	458	469	Right-handed alpha
Helix 119	AN2	D	472	476	Right-handed 310
Helix 120	AN3	D	492	509	Right-handed alpha
Helix 121	AN4	D	509	517	Right-handed alpha
Helix 122	AN5	D	533	545	Right-handed alpha
Helix 123	AN6	D	553	563	Right-handed alpha
Helix 124	AN7	D	568	579	Right-handed alpha
Helix 125	AN8	D	609	621	Right-handed alpha
Helix 126	AN9	D	659	671	Right-handed alpha
Helix 127	AO1	D	682	689	Right-handed alpha
Helix 128	AO2	D	693	719	Right-handed alpha
Helix 129	AO3	D	754	764	Right-handed alpha
Helix 130	AO4	D	770	787	Right-handed alpha
Helix 131	AO5	E	212	216	Right-handed 310
Helix 132	AO6	E	219	236	Right-handed alpha
Helix 133	AO7	E	236	244	Right-handed alpha
Helix 134	AO8	E	260	273	Right-handed alpha
Helix 135	AO9	E	280	286	Right-handed alpha
Helix 136	AP1	E	291	306	Right-handed alpha
Helix 137	AP2	E	316	319	Right-handed 310
Helix 138	AP3	E	330	344	Right-handed alpha
Helix 139	AP4	E	364	368	Right-handed 310
Helix 140	AP5	E	383	395	Right-handed alpha
Helix 141	AP6	E	405	413	Right-handed alpha
Helix 142	AP7	E	417	437	Right-handed alpha
Helix 143	AP8	E	448	454	Right-handed alpha
Helix 144	AP9	E	458	469	Right-handed alpha
Helix 145	AQ1	E	472	476	Right-handed 310
Helix 146	AQ2	E	492	509	Right-handed alpha
Helix 147	AQ3	E	509	517	Right-handed alpha
Helix 148	AQ4	E	533	545	Right-handed alpha
Helix 149	AQ5	E	553	562	Right-handed alpha
Helix 150	AQ6	E	568	579	Right-handed alpha
Helix 151	AQ7	E	609	621	Right-handed alpha
Helix 152	AQ8	E	640	645	Right-handed 310
Helix 153	AQ9	E	659	671	Right-handed alpha
Helix 154	AR1	E	672	674	Right-handed 310
Helix 155	AR2	E	682	689	Right-handed alpha
Helix 156	AR3	E	693	719	Right-handed alpha
Helix 157	AR4	E	754	764	Right-handed alpha
Helix 158	AR5	E	770	787	Right-handed alpha
Helix 159	AR6	F	212	216	Right-handed 310
Helix 160	AR7	F	219	236	Right-handed alpha
Helix 161	AR8	F	236	244	Right-handed alpha
Helix 162	AR9	F	260	273	Right-handed alpha
Helix 163	AS1	F	281	286	Right-handed alpha
Helix 164	AS2	F	290	306	Right-handed alpha
Helix 165	AS3	F	316	319	Right-handed 310
Helix 166	AS4	F	322	326	Right-handed 310
Helix 167	AS5	F	328	345	Right-handed alpha
Helix 168	AS6	F	346	348	Right-handed 310
Helix 169	AS7	F	364	368	Right-handed 310
Helix 170	AS8	F	383	395	Right-handed alpha
Helix 171	AS9	F	405	413	Right-handed alpha
Helix 172	AT1	F	417	437	Right-handed alpha
Helix 173	AT2	F	438	440	Right-handed 310
Helix 174	AT3	F	448	455	Right-handed alpha
Helix 175	AT4	F	458	468	Right-handed alpha
Helix 176	AT5	F	472	476	Right-handed 310
Helix 177	AT6	F	492	509	Right-handed alpha
Helix 178	AT7	F	509	517	Right-handed alpha
Helix 179	AT8	F	533	545	Right-handed alpha
Helix 180	AT9	F	553	563	Right-handed alpha
Helix 181	AU1	F	568	579	Right-handed alpha
Helix 182	AU2	F	588	592	Right-handed 310
Helix 183	AU3	F	609	620	Right-handed alpha
Helix 184	AU4	F	640	645	Right-handed 310
Helix 185	AU5	F	659	671	Right-handed alpha
Helix 186	AU6	F	682	688	Right-handed alpha
Helix 187	AU7	F	693	719	Right-handed alpha
Helix 188	AU8	F	754	763	Right-handed alpha
Helix 189	AU9	F	770	787	Right-handed alpha
Helix 190	AV1	G	116	125	Right-handed alpha
Helix 191	AV2	G	155	162	Right-handed alpha
Helix 192	AV3	G	169	180	Right-handed alpha
Helix 193	AV4	G	210	214	Right-handed 310
Helix 194	AV5	G	242	256	Right-handed alpha
Helix 195	AV6	G	299	318	Right-handed alpha
Helix 196	AV7	G	351	364	Right-handed alpha
Helix 197	AV8	G	402	409	Right-handed alpha
Helix 198	AV9	G	460	463	Right-handed 310
Helix 199	AW1	G	500	509	Right-handed alpha
Helix 200	AW2	G	509	515	Right-handed alpha
Helix 201	AW3	G	516	523	Right-handed alpha
Helix 202	AW4	G	526	537	Right-handed alpha
Helix 203	AW5	G	540	552	Right-handed alpha
Helix 204	AW6	G	556	566	Right-handed alpha
Helix 205	AW7	G	566	579	Right-handed alpha
Helix 206	AW8	H	243	253	Right-handed alpha
Helix 207	AW9	J	122	135	Right-handed alpha
Helix 208	AX1	J	155	160	Right-handed alpha
Helix 209	AX2	K	222	235	Right-handed alpha

There are 24 sheets in PDB entry 8DAS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	39	first strand
Strand 2	A	91	93	parallel
Strand 3	A	48	51	anti-parallel
Strand 4	A	76	83	parallel
Strand 5	A	66	70	anti-parallel
Strand 6	A	109	114	anti-parallel
Strand 7	A	35	39	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	155	156	first strand
Strand 2	A	184	193	anti-parallel
Strand 3	A	119	128	parallel
Strand 4	A	169	179	anti-parallel
Strand 5	A	161	166	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	275	279	first strand
Strand 2	A	309	313	parallel
Strand 3	A	351	357	parallel
Strand 4	A	251	254	parallel
Strand 5	A	375	378	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	479	480	first strand
Strand 2	A	548	552	anti-parallel
Strand 3	A	582	586	parallel
Strand 4	A	627	633	parallel
Strand 5	A	524	527	parallel
Strand 6	A	651	654	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	378	first strand
Strand 2	B	250	254	parallel
Strand 3	B	351	356	parallel
Strand 4	B	309	313	parallel
Strand 5	B	275	279	parallel
Strand 6	G	215	216	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	548	552	first strand
Strand 2	B	582	586	parallel
Strand 3	B	627	633	parallel
Strand 4	B	523	527	parallel
Strand 5	B	651	654	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	37	first strand
Strand 2	C	109	114	anti-parallel
Strand 3	C	66	70	anti-parallel
Strand 4	C	76	83	anti-parallel
Strand 5	C	48	51	parallel
Strand 6	C	92	93	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	166	first strand
Strand 2	C	169	179	anti-parallel
Strand 3	C	123	128	anti-parallel
Strand 4	C	191	193	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	157	first strand
Strand 2	C	183	186	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	275	276	first strand
Strand 2	C	309	314	parallel
Strand 3	C	351	357	parallel
Strand 4	C	250	254	parallel
Strand 5	C	376	378	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	548	552	first strand
Strand 2	C	582	586	parallel
Strand 3	C	627	633	parallel
Strand 4	C	524	527	parallel
Strand 5	C	651	654	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	275	280	first strand
Strand 2	D	309	314	parallel
Strand 3	D	351	357	parallel
Strand 4	D	250	254	parallel
Strand 5	D	375	378	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	548	552	first strand
Strand 2	D	582	586	parallel
Strand 3	D	627	633	parallel
Strand 4	D	523	527	parallel
Strand 5	D	652	654	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	312	314	first strand
Strand 2	E	353	357	parallel
Strand 3	E	250	254	parallel
Strand 4	E	375	378	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	479	480	first strand
Strand 2	E	548	552	anti-parallel
Strand 3	E	582	586	parallel
Strand 4	E	627	631	parallel
Strand 5	E	523	527	parallel
Strand 6	E	652	654	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	275	280	first strand
Strand 2	F	309	314	parallel
Strand 3	F	351	357	parallel
Strand 4	F	251	254	parallel
Strand 5	F	375	378	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	548	552	first strand
Strand 2	F	582	586	parallel
Strand 3	F	627	633	parallel
Strand 4	F	524	527	parallel
Strand 5	F	651	654	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	224	226	first strand
Strand 2	G	437	443	parallel
Strand 3	G	447	452	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	382	386	first strand
Strand 2	G	321	327	parallel
Strand 3	G	260	270	anti-parallel
Strand 4	G	276	285	anti-parallel
Strand 5	G	236	239	parallel
Strand 6	G	467	469	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	295	297	first strand
Strand 2	H	298	300	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	399	400	first strand
Strand 2	G	464	465	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	422	424	first strand
Strand 2	G	456	458	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	112	116	first strand
Strand 2	J	102	106	anti-parallel
Strand 3	J	165	171	parallel
Strand 4	J	141	144	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	212	216	first strand
Strand 2	K	202	206	anti-parallel
Strand 3	K	265	270	parallel
Strand 4	K	242	245	anti-parallel
Strand 5	K	248	250	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8DAS

Analysis of interatomic Contacts of Structural Units in PDB entry:
8DAS