Analysis of interatomic Contacts of Structural Units in PDB entry:
8DE9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8DE9 entry

There are 2 chains in PDB entry 8DE9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 40VAL 298
B
 THR 40ARG 297
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8DE9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 91Right-handed alpha
Helix 2
AA2
A
95 113Right-handed alpha
Helix 3
AA3
A
128 142Right-handed alpha
Helix 4
AA4
A
152 196Right-handed alpha
Helix 5
AA5
A
202 234Right-handed alpha
Helix 6
AA6
A
237 250Right-handed alpha
Helix 7
AA7
A
269 298Right-handed alpha
Helix 8
AA8
B
43 91Right-handed alpha
Helix 9
AA9
B
95 113Right-handed alpha
Helix 10
AB1
B
128 142Right-handed alpha
Helix 11
AB2
B
152 193Right-handed alpha
Helix 12
AB3
B
204 223Right-handed alpha
Helix 13
AB4
B
223 235Right-handed alpha
Helix 14
AB5
B
237 250Right-handed alpha
Helix 15
AB6
B
269 297Right-handed alpha
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There are no sheets in PDB entry 8DE9
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