Analysis of interatomic Contacts of Structural Units in PDB entry:
8DOT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8DOT entry

There is 1 chain in PDB entry 8DOT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 99GLU 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8DOT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
104 108Right-handed 310
Helix 2
AA2
A
110 123Right-handed alpha
Helix 3
AA3
A
128 135Right-handed 310
Helix 4
AA4
A
146 165Right-handed alpha
Helix 5
AA5
A
167 183Right-handed alpha
Helix 6
AA6
A
189 204Right-handed alpha
Helix 7
AA7
A
207 232Right-handed alpha
Helix 8
AA8
A
232 244Right-handed alpha
Helix 9
AA9
A
246 260Right-handed alpha
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There are no sheets in PDB entry 8DOT
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