Analysis of interatomic Contacts of Structural Units in PDB entry:
8DQY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8DQY entry

There is 1 chain in PDB entry 8DQY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 37TRP 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 8DQY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 45Right-handed alpha
Helix 2
AA2
A
48 60Right-handed alpha
Helix 3
AA3
A
60 73Right-handed alpha
Helix 4
AA4
A
74 76Right-handed 310
Helix 5
AA5
A
77 90Right-handed alpha
Helix 6
AA6
A
92 105Right-handed alpha
Helix 7
AA7
A
107 113Right-handed alpha
Helix 8
AA8
A
117 122Right-handed alpha
Helix 9
AA9
A
123 134Right-handed alpha
Helix 10
AB1
A
135 137Right-handed 310
Helix 11
AB2
A
141 147Right-handed 310
Back to top of page
There are no sheets in PDB entry 8DQY
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il