Analysis of interatomic Contacts of Structural Units in PDB entry:
8DTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8DTF entry

There are 2 chains in PDB entry 8DTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 44LYS 846
B
 ASN 44LYS 846
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 86 helices in PDB entry 8DTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 56Right-handed alpha
Helix 2
AA2
A
58 73Right-handed alpha
Helix 3
AA3
A
76 90Right-handed alpha
Helix 4
AA4
A
92 107Right-handed alpha
Helix 5
AA5
A
110 124Right-handed alpha
Helix 6
AA6
A
126 141Right-handed alpha
Helix 7
AA7
A
144 165Right-handed alpha
Helix 8
AA8
A
167 182Right-handed alpha
Helix 9
AA9
A
185 199Right-handed alpha
Helix 10
AB1
A
201 216Right-handed alpha
Helix 11
AB2
A
219 233Right-handed alpha
Helix 12
AB3
A
235 250Right-handed alpha
Helix 13
AB4
A
253 275Right-handed alpha
Helix 14
AB5
A
276 291Right-handed alpha
Helix 15
AB6
A
294 309Right-handed alpha
Helix 16
AB7
A
310 325Right-handed alpha
Helix 17
AB8
A
328 342Right-handed alpha
Helix 18
AB9
A
344 359Right-handed alpha
Helix 19
AC1
A
362 377Right-handed alpha
Helix 20
AC2
A
378 393Right-handed alpha
Helix 21
AC3
A
396 410Right-handed alpha
Helix 22
AC4
A
412 427Right-handed alpha
Helix 23
AC5
A
430 445Right-handed alpha
Helix 24
AC6
A
450 466Right-handed alpha
Helix 25
AC7
A
497 507Right-handed alpha
Helix 26
AC8
A
525 539Right-handed alpha
Helix 27
AC9
A
550 560Right-handed alpha
Helix 28
AD1
A
576 582Right-handed alpha
Helix 29
AD2
A
647 653Right-handed alpha
Helix 30
AD3
A
662 666Right-handed 310
Helix 31
AD4
A
667 681Right-handed alpha
Helix 32
AD5
A
691 694Right-handed 310
Helix 33
AD6
A
695 709Right-handed alpha
Helix 34
AD7
A
712 714Right-handed 310
Helix 35
AD8
A
724 731Right-handed alpha
Helix 36
AD9
A
732 735Right-handed 310
Helix 37
AE1
A
747 756Right-handed alpha
Helix 38
AE2
A
767 781Right-handed alpha
Helix 39
AE3
A
782 784Right-handed 310
Helix 40
AE4
A
789 803Right-handed alpha
Helix 41
AE5
A
803 821Right-handed alpha
Helix 42
AE6
A
822 824Right-handed 310
Helix 43
AE7
A
825 846Right-handed alpha
Helix 44
AE8
B
45 56Right-handed alpha
Helix 45
AE9
B
58 73Right-handed alpha
Helix 46
AF1
B
76 90Right-handed alpha
Helix 47
AF2
B
92 107Right-handed alpha
Helix 48
AF3
B
110 124Right-handed alpha
Helix 49
AF4
B
126 141Right-handed alpha
Helix 50
AF5
B
144 165Right-handed alpha
Helix 51
AF6
B
167 182Right-handed alpha
Helix 52
AF7
B
185 199Right-handed alpha
Helix 53
AF8
B
201 216Right-handed alpha
Helix 54
AF9
B
219 233Right-handed alpha
Helix 55
AG1
B
235 250Right-handed alpha
Helix 56
AG2
B
253 275Right-handed alpha
Helix 57
AG3
B
276 291Right-handed alpha
Helix 58
AG4
B
294 309Right-handed alpha
Helix 59
AG5
B
310 325Right-handed alpha
Helix 60
AG6
B
328 342Right-handed alpha
Helix 61
AG7
B
344 359Right-handed alpha
Helix 62
AG8
B
362 377Right-handed alpha
Helix 63
AG9
B
378 393Right-handed alpha
Helix 64
AH1
B
396 410Right-handed alpha
Helix 65
AH2
B
412 427Right-handed alpha
Helix 66
AH3
B
430 445Right-handed alpha
Helix 67
AH4
B
450 466Right-handed alpha
Helix 68
AH5
B
497 507Right-handed alpha
Helix 69
AH6
B
525 539Right-handed alpha
Helix 70
AH7
B
550 560Right-handed alpha
Helix 71
AH8
B
576 582Right-handed alpha
Helix 72
AH9
B
647 653Right-handed alpha
Helix 73
AI1
B
662 666Right-handed 310
Helix 74
AI2
B
667 681Right-handed alpha
Helix 75
AI3
B
691 694Right-handed 310
Helix 76
AI4
B
695 709Right-handed alpha
Helix 77
AI5
B
712 714Right-handed 310
Helix 78
AI6
B
724 731Right-handed alpha
Helix 79
AI7
B
732 735Right-handed 310
Helix 80
AI8
B
747 756Right-handed alpha
Helix 81
AI9
B
767 781Right-handed alpha
Helix 82
AJ1
B
782 784Right-handed 310
Helix 83
AJ2
B
789 803Right-handed alpha
Helix 84
AJ3
B
803 821Right-handed alpha
Helix 85
AJ4
B
822 824Right-handed 310
Helix 86
AJ5
B
825 846Right-handed alpha
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There are 4 sheets in PDB entry 8DTF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 544first strand
Strand 2
A
513 519parallel
Strand 3
A
483 489parallel
Strand 4
A
564 567parallel
Strand 5
A
587 590parallel
Strand 6
A
605 609parallel
Strand 7
A
624 628parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
716 719first strand
Strand 2
A
684 689parallel
Strand 3
A
655 659parallel
Strand 4
A
737 739parallel
Strand 5
A
760 763parallel
Strand 6
A
786 787parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
541 544first strand
Strand 2
B
513 519parallel
Strand 3
B
483 489parallel
Strand 4
B
564 567parallel
Strand 5
B
587 590parallel
Strand 6
B
605 609parallel
Strand 7
B
624 628parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
716 719first strand
Strand 2
B
684 689parallel
Strand 3
B
655 659parallel
Strand 4
B
737 739parallel
Strand 5
B
760 763parallel
Strand 6
B
786 787parallel
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