Analysis of interatomic Contacts of Structural Units in PDB entry:
8DVZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8DVZ entry

There is 1 chain in PDB entry 8DVZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2VAL 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8DVZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 17Right-handed alpha
Helix 2
AA2
A
18 28Right-handed alpha
Helix 3
AA3
A
41 49Right-handed alpha
Helix 4
AA4
A
62 79Right-handed alpha
Helix 5
AA5
A
89 103Right-handed alpha
Helix 6
AA6
A
116 120Right-handed 310
Helix 7
AA7
A
123 144Right-handed alpha
Helix 8
AA8
A
151 161Right-handed alpha
Helix 9
AA9
A
165 167Right-handed 310
Helix 10
AB1
A
183 187Right-handed 310
Helix 11
AB2
A
205 208Right-handed 310
Helix 12
AB3
A
209 221Right-handed alpha
Helix 13
AB4
A
222 224Right-handed 310
Helix 14
AB5
A
243 249Right-handed alpha
Helix 15
AB6
A
260 267Right-handed alpha
Helix 16
AB7
A
281 290Right-handed alpha
Helix 17
AB8
A
301 306Right-handed alpha
Helix 18
AB9
A
319 333Right-handed alpha
Helix 19
AC1
A
333 352Right-handed alpha
Helix 20
AC2
A
353 367Right-handed alpha
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There are 2 sheets in PDB entry 8DVZ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
31 35parallel
Strand 3
A
3 7parallel
Strand 4
A
84 87parallel
Strand 5
A
107 112parallel
Strand 6
A
146 149parallel
Strand 7
A
169 171parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 254first strand
Strand 2
A
226 231parallel
Strand 3
A
196 201parallel
Strand 4
A
270 273parallel
Strand 5
A
294 297parallel
Strand 6
A
312 315parallel
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