Analysis of interatomic Contacts of Structural Units in PDB entry:
8E14

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8E14 entry

There are 14 chains in PDB entry 8E14 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 1	ILE 269
B	PRO 57	ILE 269
C	GLY 221	ILE 269
D	GLY 221	ILE 269
E	PRO 1	ILE 269
F	GLY 56	ILE 269
G	GLY 221	ILE 269
H	GLY 221	ILE 269
I	G 1	T 42
J	A 1	C 22
K	A 1	C 16
L	G 1	T 42
M	A 1	C 22
N	A 1	C 16

There are 34 helices in PDB entry 8E14. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	13	Right-handed alpha
Helix 2	AA2	A	15	21	Right-handed alpha
Helix 3	AA3	A	26	35	Right-handed alpha
Helix 4	AA4	A	99	105	Right-handed alpha
Helix 5	AA5	A	107	112	Right-handed alpha
Helix 6	AA6	A	129	139	Right-handed alpha
Helix 7	AA7	A	153	172	Right-handed alpha
Helix 8	AA8	A	188	198	Right-handed alpha
Helix 9	AA9	A	209	214	Right-handed alpha
Helix 10	AB1	B	97	113	Right-handed alpha
Helix 11	AB2	B	128	139	Right-handed alpha
Helix 12	AB3	B	150	153	Right-handed 310
Helix 13	AB4	B	154	174	Right-handed alpha
Helix 14	AB5	B	181	184	Right-handed 310
Helix 15	AB6	B	185	198	Right-handed alpha
Helix 16	AB7	B	207	214	Right-handed alpha
Helix 17	AB8	B	261	263	Right-handed 310
Helix 18	AB9	E	2	13	Right-handed alpha
Helix 19	AC1	E	15	24	Right-handed alpha
Helix 20	AC2	E	26	34	Right-handed alpha
Helix 21	AC3	E	99	113	Right-handed alpha
Helix 22	AC4	E	128	139	Right-handed alpha
Helix 23	AC5	E	150	152	Right-handed 310
Helix 24	AC6	E	153	158	Right-handed alpha
Helix 25	AC7	E	158	172	Right-handed alpha
Helix 26	AC8	E	184	197	Right-handed alpha
Helix 27	AC9	E	207	214	Right-handed alpha
Helix 28	AD1	F	98	113	Right-handed alpha
Helix 29	AD2	F	128	139	Right-handed alpha
Helix 30	AD3	F	155	174	Right-handed alpha
Helix 31	AD4	F	184	199	Right-handed alpha
Helix 32	AD5	F	207	214	Right-handed alpha
Helix 33	AD6	F	263	265	Right-handed 310
Helix 34	AD7	G	263	265	Right-handed 310

There are 15 sheets in PDB entry 8E14. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	65	first strand
Strand 2	A	78	81	anti-parallel
Strand 3	A	88	91	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	261	first strand
Strand 2	A	246	251	anti-parallel
Strand 3	A	233	238	anti-parallel
Strand 4	A	223	227	anti-parallel
Strand 5	A	266	267	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	66	first strand
Strand 2	B	77	81	anti-parallel
Strand 3	B	88	90	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	118	119	first strand
Strand 2	B	142	143	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	257	258	first strand
Strand 2	B	249	251	anti-parallel
Strand 3	B	233	239	anti-parallel
Strand 4	B	223	227	anti-parallel
Strand 5	B	265	267	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	261	first strand
Strand 2	C	246	251	anti-parallel
Strand 3	C	232	242	anti-parallel
Strand 4	C	223	228	anti-parallel
Strand 5	C	265	267	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	258	261	first strand
Strand 2	D	246	251	anti-parallel
Strand 3	D	237	239	anti-parallel
Strand 4	D	223	226	anti-parallel
Strand 5	D	265	267	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	61	67	first strand
Strand 2	E	76	82	anti-parallel
Strand 3	E	88	92	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	117	120	first strand
Strand 2	E	141	144	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	226	227	first strand
Strand 2	E	233	234	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	237	241	first strand
Strand 2	E	247	251	anti-parallel
Strand 3	E	257	260	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	88	91	first strand
Strand 2	F	77	82	anti-parallel
Strand 3	F	60	66	anti-parallel
Strand 4	F	117	119	parallel
Strand 5	F	141	142	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	223	224	first strand
Strand 2	F	237	239	anti-parallel
Strand 3	F	246	250	anti-parallel
Strand 4	F	257	261	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	239	241	first strand
Strand 2	G	246	249	anti-parallel
Strand 3	G	258	261	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	224	225	first strand
Strand 2	H	266	267	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8E14

Analysis of interatomic Contacts of Structural Units in PDB entry:
8E14