Analysis of interatomic Contacts of Structural Units in PDB entry:
8E18


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E18 entry

There is 1 chain in PDB entry 8E18 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 8ALA 472
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8E18. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 78Right-handed 310
Helix 2
AA2
A
79 88Right-handed alpha
Helix 3
AA3
A
89 95Right-handed alpha
Helix 4
AA4
A
117 122Right-handed alpha
Helix 5
AA5
A
130 150Right-handed alpha
Helix 6
AA6
A
152 156Right-handed 310
Helix 7
AA7
A
157 173Right-handed alpha
Helix 8
AA8
A
183 197Right-handed alpha
Helix 9
AA9
A
210 214Right-handed 310
Helix 10
AB1
A
215 239Right-handed alpha
Helix 11
AB2
A
240 245Right-handed alpha
Helix 12
AB3
A
249 267Right-handed alpha
Helix 13
AB4
A
277 290Right-handed alpha
Helix 14
AB5
A
291 293Right-handed 310
Helix 15
AB6
A
294 308Right-handed alpha
Helix 16
AB7
A
312 324Right-handed alpha
Helix 17
AB8
A
328 342Right-handed alpha
Helix 18
AB9
A
348 358Right-handed alpha
Helix 19
AC1
A
358 363Right-handed alpha
Helix 20
AC2
A
366 372Right-handed alpha
Helix 21
AC3
A
374 379Right-handed 310
Helix 22
AC4
A
411 422Right-handed alpha
Helix 23
AC5
A
445 459Right-handed alpha
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There are 2 sheets in PDB entry 8E18. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 18first strand
Strand 2
A
29 36anti-parallel
Strand 3
A
46 54anti-parallel
Strand 4
A
96 101anti-parallel
Strand 5
A
64 68parallel
Strand 6
A
177 182parallel
Strand 7
A
200 206parallel
Strand 8
A
399 406parallel
Strand 9
A
426 435parallel
Strand 10
A
466 469parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 271first strand
Strand 2
A
274 276anti-parallel
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