Analysis of interatomic Contacts of Structural Units in PDB entry:
8E1D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E1D entry

There are 2 chains in PDB entry 8E1D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 108ALA 141
A
 GLY 1721LYS 1812
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 8E1D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
109 115Right-handed 310
Helix 2
AA2
B
117 130Right-handed alpha
Helix 3
AA3
B
131 136Right-handed alpha
Helix 4
AA4
A
1727 1748Right-handed alpha
Helix 5
AA5
A
1757 1769Right-handed alpha
Helix 6
AA6
A
1773 1777Right-handed 310
Helix 7
AA7
A
1779 1794Right-handed alpha
Helix 8
AA8
A
1803 1810Right-handed alpha
Back to top of page
There are no sheets in PDB entry 8E1D
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il