Analysis of interatomic Contacts of Structural Units in PDB entry:
8E1E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E1E entry

There are 3 chains in PDB entry 8E1E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1LYS 232
B
 SER 1LYS 232
C
 SER 1LYS 232
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 8E1E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 26Right-handed alpha
Helix 2
AA2
A
28 46Right-handed alpha
Helix 3
AA3
A
49 79Right-handed alpha
Helix 4
AA4
A
81 102Right-handed alpha
Helix 5
AA5
A
103 133Right-handed alpha
Helix 6
AA6
A
139 156Right-handed alpha
Helix 7
AA7
A
161 183Right-handed alpha
Helix 8
AA8
A
188 191Right-handed 310
Helix 9
AA9
A
192 210Right-handed alpha
Helix 10
AB1
A
214 230Right-handed alpha
Helix 11
AB2
B
3 25Right-handed alpha
Helix 12
AB3
B
28 46Right-handed alpha
Helix 13
AB4
B
50 79Right-handed alpha
Helix 14
AB5
B
81 102Right-handed alpha
Helix 15
AB6
B
103 133Right-handed alpha
Helix 16
AB7
B
137 154Right-handed alpha
Helix 17
AB8
B
157 187Right-handed alpha
Helix 18
AB9
B
193 205Right-handed alpha
Helix 19
AC1
B
206 208Right-handed 310
Helix 20
AC2
B
213 230Right-handed alpha
Helix 21
AC3
C
3 26Right-handed alpha
Helix 22
AC4
C
28 46Right-handed alpha
Helix 23
AC5
C
50 79Right-handed alpha
Helix 24
AC6
C
81 102Right-handed alpha
Helix 25
AC7
C
103 133Right-handed alpha
Helix 26
AC8
C
136 156Right-handed alpha
Helix 27
AC9
C
157 184Right-handed alpha
Helix 28
AD1
C
189 210Right-handed alpha
Helix 29
AD2
C
213 230Right-handed alpha
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There are no sheets in PDB entry 8E1E
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il