Analysis of interatomic Contacts of Structural Units in PDB entry:
8E2W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E2W entry

There is 1 chain in PDB entry 8E2W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 104ALA 726
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 8E2W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
110 114Right-handed 310
Helix 2
AA2
A
115 117Right-handed 310
Helix 3
AA3
A
118 131Right-handed alpha
Helix 4
AA4
A
144 159Right-handed alpha
Helix 5
AA5
A
168 181Right-handed alpha
Helix 6
AA6
A
182 189Right-handed alpha
Helix 7
AA7
A
195 199Right-handed 310
Helix 8
AA8
A
201 212Right-handed alpha
Helix 9
AA9
A
214 223Right-handed alpha
Helix 10
AB1
A
246 254Right-handed alpha
Helix 11
AB2
A
258 263Right-handed alpha
Helix 12
AB3
A
272 284Right-handed alpha
Helix 13
AB4
A
294 308Right-handed alpha
Helix 14
AB5
A
340 349Right-handed alpha
Helix 15
AB6
A
355 364Right-handed alpha
Helix 16
AB7
A
369 391Right-handed alpha
Helix 17
AB8
A
401 404Right-handed 310
Helix 18
AB9
A
405 420Right-handed alpha
Helix 19
AC1
A
426 444Right-handed alpha
Helix 20
AC2
A
470 480Right-handed alpha
Helix 21
AC3
A
498 506Right-handed alpha
Helix 22
AC4
A
520 524Right-handed 310
Helix 23
AC5
A
541 559Right-handed alpha
Helix 24
AC6
A
569 585Right-handed alpha
Helix 25
AC7
A
596 610Right-handed alpha
Helix 26
AC8
A
620 625Right-handed alpha
Helix 27
AC9
A
636 640Right-handed 310
Helix 28
AD1
A
658 669Right-handed alpha
Helix 29
AD2
A
669 686Right-handed alpha
Helix 30
AD3
A
703 708Right-handed 310
Helix 31
AD4
A
713 723Right-handed alpha
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There are 3 sheets in PDB entry 8E2W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 192first strand
Strand 2
A
290 293parallel
Strand 3
A
163 166parallel
Strand 4
A
330 336parallel
Strand 5
A
481 488parallel
Strand 6
A
134 138parallel
Strand 7
A
512 514parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 354first strand
Strand 2
A
462 466anti-parallel
Strand 3
A
449 453anti-parallel
Strand 4
A
398 399anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
588 590first strand
Strand 2
A
615 618parallel
Strand 3
A
563 566parallel
Strand 4
A
645 648parallel
Strand 5
A
697 701parallel
Strand 6
A
527 529parallel
Strand 7
A
724 725parallel
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