Analysis of interatomic Contacts of Structural Units in PDB entry:
8E37

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8E37 entry

There are 7 chains in PDB entry 8E37 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	SER -1	ARG 183
A	SER -1	ARG 183
C	SER -1	ARG 183
D	SER -1	ARG 183
E	SER -1	ARG 183
F	SER -1	ARG 183
G	SER -1	LEU 114

There are 92 helices in PDB entry 8E37. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	5	22	Right-handed alpha
Helix 2	AA2	B	22	37	Right-handed alpha
Helix 3	AA3	B	50	52	Right-handed 310
Helix 4	AA4	B	81	90	Right-handed alpha
Helix 5	AA5	B	91	95	Right-handed 310
Helix 6	AA6	B	96	103	Right-handed alpha
Helix 7	AA7	B	115	119	Right-handed 310
Helix 8	AA8	B	125	132	Right-handed 310
Helix 9	AA9	B	138	143	Right-handed alpha
Helix 10	AB1	B	149	163	Right-handed alpha
Helix 11	AB2	B	165	181	Right-handed alpha
Helix 12	AB3	A	0	5	Right-handed alpha
Helix 13	AB4	A	5	22	Right-handed alpha
Helix 14	AB5	A	22	37	Right-handed alpha
Helix 15	AB6	A	50	52	Right-handed 310
Helix 16	AB7	A	75	80	Right-handed alpha
Helix 17	AB8	A	81	90	Right-handed alpha
Helix 18	AB9	A	91	95	Right-handed 310
Helix 19	AC1	A	96	103	Right-handed alpha
Helix 20	AC2	A	125	132	Right-handed 310
Helix 21	AC3	A	149	163	Right-handed alpha
Helix 22	AC4	A	165	182	Right-handed alpha
Helix 23	AC5	C	0	5	Right-handed alpha
Helix 24	AC6	C	5	22	Right-handed alpha
Helix 25	AC7	C	22	37	Right-handed alpha
Helix 26	AC8	C	50	52	Right-handed 310
Helix 27	AC9	C	81	90	Right-handed alpha
Helix 28	AD1	C	91	95	Right-handed 310
Helix 29	AD2	C	96	103	Right-handed alpha
Helix 30	AD3	C	115	119	Right-handed 310
Helix 31	AD4	C	125	131	Right-handed 310
Helix 32	AD5	C	149	163	Right-handed alpha
Helix 33	AD6	C	165	180	Right-handed alpha
Helix 34	AD7	D	0	5	Right-handed alpha
Helix 35	AD8	D	5	22	Right-handed alpha
Helix 36	AD9	D	22	37	Right-handed alpha
Helix 37	AE1	D	50	52	Right-handed 310
Helix 38	AE2	D	81	90	Right-handed alpha
Helix 39	AE3	D	91	95	Right-handed 310
Helix 40	AE4	D	96	103	Right-handed alpha
Helix 41	AE5	D	115	122	Right-handed 310
Helix 42	AE6	D	125	132	Right-handed 310
Helix 43	AE7	D	149	163	Right-handed alpha
Helix 44	AE8	D	165	182	Right-handed alpha
Helix 45	AE9	E	0	5	Right-handed alpha
Helix 46	AF1	E	5	22	Right-handed alpha
Helix 47	AF2	E	22	37	Right-handed alpha
Helix 48	AF3	E	50	52	Right-handed 310
Helix 49	AF4	E	81	90	Right-handed alpha
Helix 50	AF5	E	91	95	Right-handed 310
Helix 51	AF6	E	96	103	Right-handed alpha
Helix 52	AF7	E	118	122	Right-handed 310
Helix 53	AF8	E	125	132	Right-handed 310
Helix 54	AF9	E	138	143	Right-handed alpha
Helix 55	AG1	E	149	163	Right-handed alpha
Helix 56	AG2	E	165	181	Right-handed alpha
Helix 57	AG3	F	0	5	Right-handed alpha
Helix 58	AG4	F	5	22	Right-handed alpha
Helix 59	AG5	F	22	37	Right-handed alpha
Helix 60	AG6	F	50	52	Right-handed 310
Helix 61	AG7	F	75	80	Right-handed alpha
Helix 62	AG8	F	81	90	Right-handed alpha
Helix 63	AG9	F	91	95	Right-handed 310
Helix 64	AH1	F	96	103	Right-handed alpha
Helix 65	AH2	F	118	122	Right-handed 310
Helix 66	AH3	F	125	132	Right-handed 310
Helix 67	AH4	F	138	143	Right-handed alpha
Helix 68	AH5	F	149	163	Right-handed alpha
Helix 69	AH6	F	165	182	Right-handed alpha
Helix 70	AH7	G	0	5	Right-handed alpha
Helix 71	AH8	G	5	22	Right-handed alpha
Helix 72	AH9	G	22	37	Right-handed alpha
Helix 73	AI1	G	50	52	Right-handed 310
Helix 74	AI2	G	81	90	Right-handed alpha
Helix 75	AI3	G	91	95	Right-handed 310
Helix 76	AI4	G	96	103	Right-handed alpha
Helix 77	AI5	G	115	119	Right-handed 310
Helix 78	AI6	G	125	132	Right-handed 310
Helix 79	AI7	G	149	163	Right-handed alpha
Helix 80	AI8	G	165	180	Right-handed alpha
Helix 81	AI9	H	0	5	Right-handed alpha
Helix 82	AJ1	H	5	22	Right-handed alpha
Helix 83	AJ2	H	22	37	Right-handed alpha
Helix 84	AJ3	H	50	52	Right-handed 310
Helix 85	AJ4	H	81	90	Right-handed alpha
Helix 86	AJ5	H	91	95	Right-handed 310
Helix 87	AJ6	H	96	103	Right-handed alpha
Helix 88	AJ7	H	115	119	Right-handed 310
Helix 89	AJ8	H	125	132	Right-handed 310
Helix 90	AJ9	H	138	143	Right-handed alpha
Helix 91	AK1	H	149	163	Right-handed alpha
Helix 92	AK2	H	165	182	Right-handed alpha

There are 16 sheets in PDB entry 8E37. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	48	first strand
Strand 2	B	54	60	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	109	first strand
Strand 2	B	135	137	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	48	first strand
Strand 2	A	54	60	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	109	first strand
Strand 2	A	135	137	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	48	first strand
Strand 2	C	54	60	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	109	first strand
Strand 2	C	135	137	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	48	first strand
Strand 2	D	54	60	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	107	109	first strand
Strand 2	D	135	137	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	42	48	first strand
Strand 2	E	54	60	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	107	109	first strand
Strand 2	E	135	137	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	42	48	first strand
Strand 2	F	54	60	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	107	109	first strand
Strand 2	F	135	137	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	42	48	first strand
Strand 2	G	54	60	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	107	109	first strand
Strand 2	G	135	137	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	42	48	first strand
Strand 2	H	54	60	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	107	109	first strand
Strand 2	H	135	137	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8E37

Analysis of interatomic Contacts of Structural Units in PDB entry:
8E37