Analysis of interatomic Contacts of Structural Units in PDB entry:
8E4L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E4L entry

There are 4 chains in PDB entry 8E4L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 40LYS 1104
B
 ASP 40LYS 1104
C
 ASP 40LYS 1104
D
 ASP 40LYS 1104
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are188 helices in PDB entry 8E4L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 50Right-handed alpha
Helix 2
AA2
A
125 136Right-handed alpha
Helix 3
AA3
A
158 176Right-handed alpha
Helix 4
AA4
A
187 202Right-handed alpha
Helix 5
AA5
A
274 287Right-handed alpha
Helix 6
AA6
A
309 323Right-handed alpha
Helix 7
AA7
A
335 344Right-handed alpha
Helix 8
AA8
A
350 362Right-handed alpha
Helix 9
AA9
A
362 369Right-handed alpha
Helix 10
AB1
A
370 387Right-handed alpha
Helix 11
AB2
A
401 419Right-handed alpha
Helix 12
AB3
A
419 425Right-handed alpha
Helix 13
AB4
A
425 437Right-handed alpha
Helix 14
AB5
A
438 446Right-handed alpha
Helix 15
AB6
A
447 450Right-handed 310
Helix 16
AB7
A
454 468Right-handed alpha
Helix 17
AB8
A
470 482Right-handed alpha
Helix 18
AB9
A
483 488Right-handed alpha
Helix 19
AC1
A
489 500Right-handed alpha
Helix 20
AC2
A
502 516Right-handed alpha
Helix 21
AC3
A
518 533Right-handed alpha
Helix 22
AC4
A
559 571Right-handed alpha
Helix 23
AC5
A
573 582Right-handed alpha
Helix 24
AC6
A
586 604Right-handed alpha
Helix 25
AC7
A
607 636Right-handed alpha
Helix 26
AC8
A
637 646Right-handed alpha
Helix 27
AC9
A
655 663Right-handed alpha
Helix 28
AD1
A
665 671Right-handed alpha
Helix 29
AD2
A
671 684Right-handed alpha
Helix 30
AD3
A
691 702Right-handed alpha
Helix 31
AD4
A
726 733Right-handed alpha
Helix 32
AD5
A
733 758Right-handed alpha
Helix 33
AD6
A
764 789Right-handed alpha
Helix 34
AD7
A
791 796Right-handed alpha
Helix 35
AD8
A
796 819Right-handed alpha
Helix 36
AD9
A
821 842Right-handed alpha
Helix 37
AE1
A
843 849Right-handed 310
Helix 38
AE2
A
853 890Right-handed alpha
Helix 39
AE3
A
894 904Right-handed alpha
Helix 40
AE4
A
904 914Right-handed alpha
Helix 41
AE5
A
917 923Right-handed alpha
Helix 42
AE6
A
951 964Right-handed alpha
Helix 43
AE7
A
967 989Right-handed alpha
Helix 44
AE8
A
992 1007Right-handed alpha
Helix 45
AE9
A
1012 1014Right-handed 310
Helix 46
AF1
A
1015 1028Right-handed alpha
Helix 47
AF2
A
1051 1104Right-handed alpha
Helix 48
AF3
B
41 50Right-handed alpha
Helix 49
AF4
B
125 136Right-handed alpha
Helix 50
AF5
B
158 176Right-handed alpha
Helix 51
AF6
B
187 202Right-handed alpha
Helix 52
AF7
B
274 287Right-handed alpha
Helix 53
AF8
B
309 323Right-handed alpha
Helix 54
AF9
B
335 344Right-handed alpha
Helix 55
AG1
B
350 362Right-handed alpha
Helix 56
AG2
B
362 369Right-handed alpha
Helix 57
AG3
B
370 387Right-handed alpha
Helix 58
AG4
B
401 419Right-handed alpha
Helix 59
AG5
B
419 425Right-handed alpha
Helix 60
AG6
B
425 437Right-handed alpha
Helix 61
AG7
B
438 446Right-handed alpha
Helix 62
AG8
B
447 450Right-handed 310
Helix 63
AG9
B
454 468Right-handed alpha
Helix 64
AH1
B
470 482Right-handed alpha
Helix 65
AH2
B
483 488Right-handed alpha
Helix 66
AH3
B
489 500Right-handed alpha
Helix 67
AH4
B
502 516Right-handed alpha
Helix 68
AH5
B
518 533Right-handed alpha
Helix 69
AH6
B
559 571Right-handed alpha
Helix 70
AH7
B
573 582Right-handed alpha
Helix 71
AH8
B
586 604Right-handed alpha
Helix 72
AH9
B
607 636Right-handed alpha
Helix 73
AI1
B
637 646Right-handed alpha
Helix 74
AI2
B
655 663Right-handed alpha
Helix 75
AI3
B
665 671Right-handed alpha
Helix 76
AI4
B
671 684Right-handed alpha
Helix 77
AI5
B
691 702Right-handed alpha
Helix 78
AI6
B
726 733Right-handed alpha
Helix 79
AI7
B
733 758Right-handed alpha
Helix 80
AI8
B
764 789Right-handed alpha
Helix 81
AI9
B
791 796Right-handed alpha
Helix 82
AJ1
B
796 819Right-handed alpha
Helix 83
AJ2
B
821 842Right-handed alpha
Helix 84
AJ3
B
843 849Right-handed 310
Helix 85
AJ4
B
853 890Right-handed alpha
Helix 86
AJ5
B
894 904Right-handed alpha
Helix 87
AJ6
B
904 914Right-handed alpha
Helix 88
AJ7
B
917 923Right-handed alpha
Helix 89
AJ8
B
951 964Right-handed alpha
Helix 90
AJ9
B
967 989Right-handed alpha
Helix 91
AK1
B
992 1007Right-handed alpha
Helix 92
AK2
B
1012 1014Right-handed 310
Helix 93
AK3
B
1015 1028Right-handed alpha
Helix 94
AK4
B
1051 1104Right-handed alpha
Helix 95
AK5
C
41 50Right-handed alpha
Helix 96
AK6
C
125 136Right-handed alpha
Helix 97
AK7
C
158 176Right-handed alpha
Helix 98
AK8
C
187 202Right-handed alpha
Helix 99
AK9
C
274 287Right-handed alpha
Helix 100
AL1
C
309 323Right-handed alpha
Helix 101
AL2
C
335 344Right-handed alpha
Helix 102
AL3
C
350 362Right-handed alpha
Helix 103
AL4
C
362 369Right-handed alpha
Helix 104
AL5
C
370 387Right-handed alpha
Helix 105
AL6
C
401 419Right-handed alpha
Helix 106
AL7
C
419 425Right-handed alpha
Helix 107
AL8
C
425 437Right-handed alpha
Helix 108
AL9
C
438 446Right-handed alpha
Helix 109
AM1
C
447 450Right-handed 310
Helix 110
AM2
C
454 468Right-handed alpha
Helix 111
AM3
C
470 482Right-handed alpha
Helix 112
AM4
C
483 488Right-handed alpha
Helix 113
AM5
C
489 500Right-handed alpha
Helix 114
AM6
C
502 516Right-handed alpha
Helix 115
AM7
C
518 533Right-handed alpha
Helix 116
AM8
C
559 571Right-handed alpha
Helix 117
AM9
C
573 582Right-handed alpha
Helix 118
AN1
C
586 604Right-handed alpha
Helix 119
AN2
C
607 636Right-handed alpha
Helix 120
AN3
C
637 646Right-handed alpha
Helix 121
AN4
C
655 663Right-handed alpha
Helix 122
AN5
C
665 671Right-handed alpha
Helix 123
AN6
C
671 684Right-handed alpha
Helix 124
AN7
C
691 702Right-handed alpha
Helix 125
AN8
C
726 733Right-handed alpha
Helix 126
AN9
C
733 758Right-handed alpha
Helix 127
AO1
C
764 789Right-handed alpha
Helix 128
AO2
C
791 796Right-handed alpha
Helix 129
AO3
C
796 819Right-handed alpha
Helix 130
AO4
C
821 842Right-handed alpha
Helix 131
AO5
C
843 849Right-handed 310
Helix 132
AO6
C
853 890Right-handed alpha
Helix 133
AO7
C
894 904Right-handed alpha
Helix 134
AO8
C
904 914Right-handed alpha
Helix 135
AO9
C
917 923Right-handed alpha
Helix 136
AP1
C
951 964Right-handed alpha
Helix 137
AP2
C
967 989Right-handed alpha
Helix 138
AP3
C
992 1007Right-handed alpha
Helix 139
AP4
C
1012 1014Right-handed 310
Helix 140
AP5
C
1015 1028Right-handed alpha
Helix 141
AP6
C
1051 1104Right-handed alpha
Helix 142
AP7
D
41 50Right-handed alpha
Helix 143
AP8
D
125 136Right-handed alpha
Helix 144
AP9
D
158 176Right-handed alpha
Helix 145
AQ1
D
187 202Right-handed alpha
Helix 146
AQ2
D
274 287Right-handed alpha
Helix 147
AQ3
D
309 323Right-handed alpha
Helix 148
AQ4
D
335 344Right-handed alpha
Helix 149
AQ5
D
350 362Right-handed alpha
Helix 150
AQ6
D
362 369Right-handed alpha
Helix 151
AQ7
D
370 387Right-handed alpha
Helix 152
AQ8
D
401 419Right-handed alpha
Helix 153
AQ9
D
419 425Right-handed alpha
Helix 154
AR1
D
425 437Right-handed alpha
Helix 155
AR2
D
438 446Right-handed alpha
Helix 156
AR3
D
447 450Right-handed 310
Helix 157
AR4
D
454 468Right-handed alpha
Helix 158
AR5
D
470 482Right-handed alpha
Helix 159
AR6
D
483 488Right-handed alpha
Helix 160
AR7
D
489 500Right-handed alpha
Helix 161
AR8
D
502 516Right-handed alpha
Helix 162
AR9
D
518 533Right-handed alpha
Helix 163
AS1
D
559 571Right-handed alpha
Helix 164
AS2
D
573 582Right-handed alpha
Helix 165
AS3
D
586 604Right-handed alpha
Helix 166
AS4
D
607 636Right-handed alpha
Helix 167
AS5
D
637 646Right-handed alpha
Helix 168
AS6
D
655 663Right-handed alpha
Helix 169
AS7
D
665 671Right-handed alpha
Helix 170
AS8
D
671 684Right-handed alpha
Helix 171
AS9
D
691 702Right-handed alpha
Helix 172
AT1
D
726 733Right-handed alpha
Helix 173
AT2
D
733 758Right-handed alpha
Helix 174
AT3
D
764 789Right-handed alpha
Helix 175
AT4
D
791 796Right-handed alpha
Helix 176
AT5
D
796 819Right-handed alpha
Helix 177
AT6
D
821 842Right-handed alpha
Helix 178
AT7
D
843 849Right-handed 310
Helix 179
AT8
D
853 890Right-handed alpha
Helix 180
AT9
D
894 904Right-handed alpha
Helix 181
AU1
D
904 914Right-handed alpha
Helix 182
AU2
D
917 923Right-handed alpha
Helix 183
AU3
D
951 964Right-handed alpha
Helix 184
AU4
D
967 989Right-handed alpha
Helix 185
AU5
D
992 1007Right-handed alpha
Helix 186
AU6
D
1012 1014Right-handed 310
Helix 187
AU7
D
1015 1028Right-handed alpha
Helix 188
AU8
D
1051 1104Right-handed alpha
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There are 4 sheets in PDB entry 8E4L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 120first strand
Strand 2
A
259 263parallel
Strand 3
A
210 214parallel
Strand 4
A
178 181parallel
Strand 5
A
144 147parallel
Strand 6
A
301 305parallel
Strand 7
A
326 330parallel
Strand 8
A
391 395parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
259 263parallel
Strand 3
B
210 214parallel
Strand 4
B
178 181parallel
Strand 5
B
144 147parallel
Strand 6
B
301 305parallel
Strand 7
B
326 330parallel
Strand 8
B
391 395parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
116 120first strand
Strand 2
C
259 263parallel
Strand 3
C
210 214parallel
Strand 4
C
178 181parallel
Strand 5
C
144 147parallel
Strand 6
C
301 305parallel
Strand 7
C
326 330parallel
Strand 8
C
391 395parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
116 120first strand
Strand 2
D
259 263parallel
Strand 3
D
210 214parallel
Strand 4
D
178 181parallel
Strand 5
D
144 147parallel
Strand 6
D
301 305parallel
Strand 7
D
326 330parallel
Strand 8
D
391 395parallel
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