Analysis of interatomic Contacts of Structural Units in PDB entry:
8E4N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E4N entry

There are 4 chains in PDB entry 8E4N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 40LYS 1104
B
 ASP 40LYS 1104
C
 ASP 40LYS 1104
D
 ASP 40LYS 1104
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are180 helices in PDB entry 8E4N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 49Right-handed alpha
Helix 2
AA2
A
125 137Right-handed alpha
Helix 3
AA3
A
158 176Right-handed alpha
Helix 4
AA4
A
187 202Right-handed alpha
Helix 5
AA5
A
273 288Right-handed alpha
Helix 6
AA6
A
309 322Right-handed alpha
Helix 7
AA7
A
333 343Right-handed alpha
Helix 8
AA8
A
351 362Right-handed alpha
Helix 9
AA9
A
362 369Right-handed alpha
Helix 10
AB1
A
370 386Right-handed alpha
Helix 11
AB2
A
402 419Right-handed alpha
Helix 12
AB3
A
426 437Right-handed alpha
Helix 13
AB4
A
438 445Right-handed alpha
Helix 14
AB5
A
454 469Right-handed alpha
Helix 15
AB6
A
470 480Right-handed alpha
Helix 16
AB7
A
483 488Right-handed alpha
Helix 17
AB8
A
489 500Right-handed alpha
Helix 18
AB9
A
502 516Right-handed alpha
Helix 19
AC1
A
518 534Right-handed alpha
Helix 20
AC2
A
559 571Right-handed alpha
Helix 21
AC3
A
573 582Right-handed alpha
Helix 22
AC4
A
586 603Right-handed alpha
Helix 23
AC5
A
607 636Right-handed alpha
Helix 24
AC6
A
637 646Right-handed alpha
Helix 25
AC7
A
655 663Right-handed alpha
Helix 26
AC8
A
665 670Right-handed alpha
Helix 27
AC9
A
671 684Right-handed alpha
Helix 28
AD1
A
691 701Right-handed alpha
Helix 29
AD2
A
702 707Right-handed 310
Helix 30
AD3
A
723 732Right-handed alpha
Helix 31
AD4
A
733 759Right-handed alpha
Helix 32
AD5
A
765 788Right-handed alpha
Helix 33
AD6
A
789 796Right-handed alpha
Helix 34
AD7
A
796 818Right-handed alpha
Helix 35
AD8
A
821 847Right-handed alpha
Helix 36
AD9
A
848 850Right-handed 310
Helix 37
AE1
A
853 890Right-handed alpha
Helix 38
AE2
A
895 910Right-handed alpha
Helix 39
AE3
A
915 921Right-handed alpha
Helix 40
AE4
A
956 988Right-handed alpha
Helix 41
AE5
A
990 1007Right-handed alpha
Helix 42
AE6
A
1012 1025Right-handed alpha
Helix 43
AE7
A
1049 1069Right-handed alpha
Helix 44
AE8
A
1070 1074Right-handed 310
Helix 45
AE9
A
1075 1104Right-handed alpha
Helix 46
AF1
B
41 49Right-handed alpha
Helix 47
AF2
B
125 137Right-handed alpha
Helix 48
AF3
B
158 176Right-handed alpha
Helix 49
AF4
B
187 202Right-handed alpha
Helix 50
AF5
B
273 288Right-handed alpha
Helix 51
AF6
B
309 322Right-handed alpha
Helix 52
AF7
B
333 343Right-handed alpha
Helix 53
AF8
B
351 362Right-handed alpha
Helix 54
AF9
B
362 369Right-handed alpha
Helix 55
AG1
B
370 386Right-handed alpha
Helix 56
AG2
B
402 419Right-handed alpha
Helix 57
AG3
B
426 437Right-handed alpha
Helix 58
AG4
B
438 445Right-handed alpha
Helix 59
AG5
B
454 469Right-handed alpha
Helix 60
AG6
B
470 480Right-handed alpha
Helix 61
AG7
B
483 488Right-handed alpha
Helix 62
AG8
B
489 500Right-handed alpha
Helix 63
AG9
B
502 516Right-handed alpha
Helix 64
AH1
B
518 534Right-handed alpha
Helix 65
AH2
B
559 571Right-handed alpha
Helix 66
AH3
B
573 582Right-handed alpha
Helix 67
AH4
B
586 603Right-handed alpha
Helix 68
AH5
B
607 636Right-handed alpha
Helix 69
AH6
B
637 646Right-handed alpha
Helix 70
AH7
B
655 663Right-handed alpha
Helix 71
AH8
B
665 670Right-handed alpha
Helix 72
AH9
B
671 684Right-handed alpha
Helix 73
AI1
B
691 701Right-handed alpha
Helix 74
AI2
B
702 707Right-handed 310
Helix 75
AI3
B
723 732Right-handed alpha
Helix 76
AI4
B
733 759Right-handed alpha
Helix 77
AI5
B
765 788Right-handed alpha
Helix 78
AI6
B
789 796Right-handed alpha
Helix 79
AI7
B
796 818Right-handed alpha
Helix 80
AI8
B
821 847Right-handed alpha
Helix 81
AI9
B
848 850Right-handed 310
Helix 82
AJ1
B
853 890Right-handed alpha
Helix 83
AJ2
B
895 910Right-handed alpha
Helix 84
AJ3
B
915 921Right-handed alpha
Helix 85
AJ4
B
956 988Right-handed alpha
Helix 86
AJ5
B
990 1007Right-handed alpha
Helix 87
AJ6
B
1012 1025Right-handed alpha
Helix 88
AJ7
B
1049 1069Right-handed alpha
Helix 89
AJ8
B
1070 1074Right-handed 310
Helix 90
AJ9
B
1075 1104Right-handed alpha
Helix 91
AK1
C
41 49Right-handed alpha
Helix 92
AK2
C
125 137Right-handed alpha
Helix 93
AK3
C
158 176Right-handed alpha
Helix 94
AK4
C
187 202Right-handed alpha
Helix 95
AK5
C
273 288Right-handed alpha
Helix 96
AK6
C
309 322Right-handed alpha
Helix 97
AK7
C
333 343Right-handed alpha
Helix 98
AK8
C
351 362Right-handed alpha
Helix 99
AK9
C
362 369Right-handed alpha
Helix 100
AL1
C
370 386Right-handed alpha
Helix 101
AL2
C
402 419Right-handed alpha
Helix 102
AL3
C
426 437Right-handed alpha
Helix 103
AL4
C
438 445Right-handed alpha
Helix 104
AL5
C
454 469Right-handed alpha
Helix 105
AL6
C
470 480Right-handed alpha
Helix 106
AL7
C
483 488Right-handed alpha
Helix 107
AL8
C
489 500Right-handed alpha
Helix 108
AL9
C
502 516Right-handed alpha
Helix 109
AM1
C
518 534Right-handed alpha
Helix 110
AM2
C
559 571Right-handed alpha
Helix 111
AM3
C
573 582Right-handed alpha
Helix 112
AM4
C
586 603Right-handed alpha
Helix 113
AM5
C
607 636Right-handed alpha
Helix 114
AM6
C
637 646Right-handed alpha
Helix 115
AM7
C
655 663Right-handed alpha
Helix 116
AM8
C
665 670Right-handed alpha
Helix 117
AM9
C
671 684Right-handed alpha
Helix 118
AN1
C
691 701Right-handed alpha
Helix 119
AN2
C
702 707Right-handed 310
Helix 120
AN3
C
723 732Right-handed alpha
Helix 121
AN4
C
733 759Right-handed alpha
Helix 122
AN5
C
765 788Right-handed alpha
Helix 123
AN6
C
789 796Right-handed alpha
Helix 124
AN7
C
796 818Right-handed alpha
Helix 125
AN8
C
821 847Right-handed alpha
Helix 126
AN9
C
848 850Right-handed 310
Helix 127
AO1
C
853 890Right-handed alpha
Helix 128
AO2
C
895 910Right-handed alpha
Helix 129
AO3
C
915 921Right-handed alpha
Helix 130
AO4
C
956 988Right-handed alpha
Helix 131
AO5
C
990 1007Right-handed alpha
Helix 132
AO6
C
1012 1025Right-handed alpha
Helix 133
AO7
C
1049 1069Right-handed alpha
Helix 134
AO8
C
1070 1074Right-handed 310
Helix 135
AO9
C
1075 1104Right-handed alpha
Helix 136
AP1
D
41 49Right-handed alpha
Helix 137
AP2
D
125 137Right-handed alpha
Helix 138
AP3
D
158 176Right-handed alpha
Helix 139
AP4
D
187 202Right-handed alpha
Helix 140
AP5
D
273 288Right-handed alpha
Helix 141
AP6
D
309 322Right-handed alpha
Helix 142
AP7
D
333 343Right-handed alpha
Helix 143
AP8
D
351 362Right-handed alpha
Helix 144
AP9
D
362 369Right-handed alpha
Helix 145
AQ1
D
370 386Right-handed alpha
Helix 146
AQ2
D
402 419Right-handed alpha
Helix 147
AQ3
D
426 437Right-handed alpha
Helix 148
AQ4
D
438 445Right-handed alpha
Helix 149
AQ5
D
454 469Right-handed alpha
Helix 150
AQ6
D
470 480Right-handed alpha
Helix 151
AQ7
D
483 488Right-handed alpha
Helix 152
AQ8
D
489 500Right-handed alpha
Helix 153
AQ9
D
502 516Right-handed alpha
Helix 154
AR1
D
518 534Right-handed alpha
Helix 155
AR2
D
559 571Right-handed alpha
Helix 156
AR3
D
573 582Right-handed alpha
Helix 157
AR4
D
586 603Right-handed alpha
Helix 158
AR5
D
607 636Right-handed alpha
Helix 159
AR6
D
637 646Right-handed alpha
Helix 160
AR7
D
655 663Right-handed alpha
Helix 161
AR8
D
665 670Right-handed alpha
Helix 162
AR9
D
671 684Right-handed alpha
Helix 163
AS1
D
691 701Right-handed alpha
Helix 164
AS2
D
702 707Right-handed 310
Helix 165
AS3
D
723 732Right-handed alpha
Helix 166
AS4
D
733 759Right-handed alpha
Helix 167
AS5
D
765 788Right-handed alpha
Helix 168
AS6
D
789 796Right-handed alpha
Helix 169
AS7
D
796 818Right-handed alpha
Helix 170
AS8
D
821 847Right-handed alpha
Helix 171
AS9
D
848 850Right-handed 310
Helix 172
AT1
D
853 890Right-handed alpha
Helix 173
AT2
D
895 910Right-handed alpha
Helix 174
AT3
D
915 921Right-handed alpha
Helix 175
AT4
D
956 988Right-handed alpha
Helix 176
AT5
D
990 1007Right-handed alpha
Helix 177
AT6
D
1012 1025Right-handed alpha
Helix 178
AT7
D
1049 1069Right-handed alpha
Helix 179
AT8
D
1070 1074Right-handed 310
Helix 180
AT9
D
1075 1104Right-handed alpha
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There are 4 sheets in PDB entry 8E4N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 120first strand
Strand 2
A
259 263parallel
Strand 3
A
210 216parallel
Strand 4
A
178 181parallel
Strand 5
A
144 148parallel
Strand 6
A
301 305parallel
Strand 7
A
326 329parallel
Strand 8
A
392 394parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
259 263parallel
Strand 3
B
210 216parallel
Strand 4
B
178 181parallel
Strand 5
B
144 148parallel
Strand 6
B
301 305parallel
Strand 7
B
326 329parallel
Strand 8
B
392 394parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
116 120first strand
Strand 2
C
259 263parallel
Strand 3
C
210 216parallel
Strand 4
C
178 181parallel
Strand 5
C
144 148parallel
Strand 6
C
301 305parallel
Strand 7
C
326 329parallel
Strand 8
C
392 394parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
116 120first strand
Strand 2
D
259 263parallel
Strand 3
D
210 216parallel
Strand 4
D
178 181parallel
Strand 5
D
144 148parallel
Strand 6
D
301 305parallel
Strand 7
D
326 329parallel
Strand 8
D
392 394parallel
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