Analysis of interatomic Contacts of Structural Units in PDB entry:
8E50


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E50 entry

There is 1 chain in PDB entry 8E50 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 87LEU 828
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 8E50. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
95 99Right-handed 310
Helix 2
AA2
A
103 109Right-handed alpha
Helix 3
AA3
A
109 117Right-handed alpha
Helix 4
AA4
A
121 125Right-handed 310
Helix 5
AA5
A
128 135Right-handed alpha
Helix 6
AA6
A
136 149Right-handed alpha
Helix 7
AA7
A
162 178Right-handed alpha
Helix 8
AA8
A
182 201Right-handed alpha
Helix 9
AA9
A
208 219Right-handed alpha
Helix 10
AB1
A
233 245Right-handed alpha
Helix 11
AB2
A
258 260Right-handed 310
Helix 12
AB3
A
263 270Right-handed alpha
Helix 13
AB4
A
289 306Right-handed alpha
Helix 14
AB5
A
330 341Right-handed alpha
Helix 15
AB6
A
364 369Right-handed alpha
Helix 16
AB7
A
380 390Right-handed alpha
Helix 17
AB8
A
406 414Right-handed alpha
Helix 18
AB9
A
423 429Right-handed alpha
Helix 19
AC1
A
430 432Right-handed 310
Helix 20
AC2
A
457 478Right-handed alpha
Helix 21
AC3
A
483 495Right-handed alpha
Helix 22
AC4
A
502 518Right-handed alpha
Helix 23
AC5
A
528 538Right-handed alpha
Helix 24
AC6
A
562 595Right-handed alpha
Helix 25
AC7
A
612 626Right-handed alpha
Helix 26
AC8
A
638 654Right-handed alpha
Helix 27
AC9
A
711 725Right-handed alpha
Helix 28
AD1
A
725 740Right-handed alpha
Helix 29
AD2
A
747 765Right-handed alpha
Helix 30
AD3
A
770 774Right-handed 310
Helix 31
AD4
A
775 790Right-handed alpha
Helix 32
AD5
A
807 810Right-handed 310
Helix 33
AD6
A
812 826Right-handed alpha
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There are 6 sheets in PDB entry 8E50. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
205 207anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 276first strand
Strand 2
A
252 256parallel
Strand 3
A
310 311parallel
Strand 4
A
224 228parallel
Strand 5
A
348 356parallel
Strand 6
A
396 400anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 276first strand
Strand 2
A
252 256parallel
Strand 3
A
310 311parallel
Strand 4
A
224 228parallel
Strand 5
A
348 356parallel
Strand 6
A
404 405anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 501first strand
Strand 2
A
555 559anti-parallel
Strand 3
A
544 548anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
610 611first strand
Strand 2
A
705 708anti-parallel
Strand 3
A
656 658anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
792 794first strand
Strand 2
A
803 805anti-parallel
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