Analysis of interatomic Contacts of Structural Units in PDB entry:
8E5H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E5H entry

There is 1 chain in PDB entry 8E5H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8E5H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 49Right-handed alpha
Helix 2
AA2
A
77 94Right-handed alpha
Helix 3
AA3
A
105 109Right-handed 310
Helix 4
AA4
A
131 135Right-handed 310
Helix 5
AA5
A
147 169Right-handed alpha
Helix 6
AA6
A
181 188Right-handed alpha
Helix 7
AA7
A
203 205Right-handed 310
Helix 8
AA8
A
206 221Right-handed alpha
Helix 9
AA9
A
245 259Right-handed alpha
Helix 10
AB1
A
281 290Right-handed alpha
Helix 11
AB2
A
302 312Right-handed alpha
Helix 12
AB3
A
321 327Right-handed alpha
Helix 13
AB4
A
329 337Right-handed alpha
Helix 14
AB5
A
344 349Right-handed 310
Helix 15
AB6
A
353 365Right-handed alpha
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There are 3 sheets in PDB entry 8E5H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
13 15anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
53 55parallel
Strand 3
A
97 102parallel
Strand 4
A
172 179parallel
Strand 5
A
225 234parallel
Strand 6
A
263 267parallel
Strand 7
A
294 297parallel
Strand 8
A
317 320parallel
Strand 9
A
19 21parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
144 145parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il