Analysis of interatomic Contacts of Structural Units in PDB entry:
8E5N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E5N entry

There are 6 chains in PDB entry 8E5N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3ASN 319
B
 ALA 3ASN 319
C
 ALA 3ASN 319
D
 ALA 3ASN 319
E
 ALA 3ASN 319
F
 ALA 3ASN 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 8E5N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 25Right-handed 310
Helix 2
AA2
A
26 34Right-handed alpha
Helix 3
AA3
A
35 43Right-handed alpha
Helix 4
AA4
A
69 90Right-handed alpha
Helix 5
AA5
A
100 102Right-handed 310
Helix 6
AA6
A
103 115Right-handed alpha
Helix 7
AA7
A
139 142Right-handed 310
Helix 8
AA8
A
143 149Right-handed alpha
Helix 9
AA9
A
170 172Right-handed 310
Helix 10
AB1
A
183 193Right-handed alpha
Helix 11
AB2
A
199 220Right-handed alpha
Helix 12
AB3
A
255 268Right-handed alpha
Helix 13
AB4
A
279 283Right-handed 310
Helix 14
AB5
A
285 304Right-handed alpha
Helix 15
AB6
B
3 6Right-handed 310
Helix 16
AB7
B
23 25Right-handed 310
Helix 17
AB8
B
26 34Right-handed alpha
Helix 18
AB9
B
35 43Right-handed alpha
Helix 19
AC1
B
69 90Right-handed alpha
Helix 20
AC2
B
100 102Right-handed 310
Helix 21
AC3
B
103 113Right-handed alpha
Helix 22
AC4
B
139 142Right-handed 310
Helix 23
AC5
B
143 149Right-handed alpha
Helix 24
AC6
B
150 153Right-handed 310
Helix 25
AC7
B
170 172Right-handed 310
Helix 26
AC8
B
183 194Right-handed alpha
Helix 27
AC9
B
200 221Right-handed alpha
Helix 28
AD1
B
234 236Right-handed 310
Helix 29
AD2
B
253 267Right-handed alpha
Helix 30
AD3
B
285 304Right-handed alpha
Helix 31
AD4
C
23 25Right-handed 310
Helix 32
AD5
C
26 34Right-handed alpha
Helix 33
AD6
C
35 43Right-handed alpha
Helix 34
AD7
C
69 90Right-handed alpha
Helix 35
AD8
C
100 102Right-handed 310
Helix 36
AD9
C
103 112Right-handed alpha
Helix 37
AE1
C
139 142Right-handed 310
Helix 38
AE2
C
143 149Right-handed alpha
Helix 39
AE3
C
150 153Right-handed 310
Helix 40
AE4
C
183 193Right-handed alpha
Helix 41
AE5
C
200 221Right-handed alpha
Helix 42
AE6
C
253 268Right-handed alpha
Helix 43
AE7
C
285 303Right-handed alpha
Helix 44
AE8
D
3 5Right-handed 310
Helix 45
AE9
D
23 25Right-handed 310
Helix 46
AF1
D
26 33Right-handed alpha
Helix 47
AF2
D
35 42Right-handed alpha
Helix 48
AF3
D
69 89Right-handed alpha
Helix 49
AF4
D
100 102Right-handed 310
Helix 50
AF5
D
103 115Right-handed alpha
Helix 51
AF6
D
139 142Right-handed 310
Helix 52
AF7
D
143 149Right-handed alpha
Helix 53
AF8
D
170 172Right-handed 310
Helix 54
AF9
D
183 194Right-handed alpha
Helix 55
AG1
D
201 220Right-handed alpha
Helix 56
AG2
D
234 236Right-handed 310
Helix 57
AG3
D
253 268Right-handed alpha
Helix 58
AG4
D
285 304Right-handed alpha
Helix 59
AG5
E
3 5Right-handed 310
Helix 60
AG6
E
23 25Right-handed 310
Helix 61
AG7
E
26 34Right-handed alpha
Helix 62
AG8
E
35 43Right-handed alpha
Helix 63
AG9
E
69 90Right-handed alpha
Helix 64
AH1
E
103 113Right-handed alpha
Helix 65
AH2
E
139 142Right-handed 310
Helix 66
AH3
E
143 149Right-handed alpha
Helix 67
AH4
E
183 194Right-handed alpha
Helix 68
AH5
E
200 221Right-handed alpha
Helix 69
AH6
E
234 236Right-handed 310
Helix 70
AH7
E
253 266Right-handed alpha
Helix 71
AH8
E
279 283Right-handed 310
Helix 72
AH9
E
285 303Right-handed alpha
Helix 73
AI1
F
23 25Right-handed 310
Helix 74
AI2
F
26 34Right-handed alpha
Helix 75
AI3
F
35 43Right-handed alpha
Helix 76
AI4
F
69 90Right-handed alpha
Helix 77
AI5
F
100 102Right-handed 310
Helix 78
AI6
F
103 115Right-handed alpha
Helix 79
AI7
F
139 142Right-handed 310
Helix 80
AI8
F
143 149Right-handed alpha
Helix 81
AI9
F
150 153Right-handed 310
Helix 82
AJ1
F
183 193Right-handed alpha
Helix 83
AJ2
F
200 207Right-handed alpha
Helix 84
AJ3
F
207 220Right-handed alpha
Helix 85
AJ4
F
234 236Right-handed 310
Helix 86
AJ5
F
253 268Right-handed alpha
Helix 87
AJ6
F
279 283Right-handed 310
Helix 88
AJ7
F
285 304Right-handed alpha
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There are 6 sheets in PDB entry 8E5N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 52first strand
Strand 2
A
7 12parallel
Strand 3
A
93 97parallel
Strand 4
A
270 276parallel
Strand 5
A
227 232parallel
Strand 6
A
119 123parallel
Strand 7
A
174 177parallel
Strand 8
A
196 198parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 52first strand
Strand 2
B
8 12parallel
Strand 3
B
93 97parallel
Strand 4
B
270 276parallel
Strand 5
B
227 232parallel
Strand 6
B
119 123parallel
Strand 7
B
174 179parallel
Strand 8
B
197 199parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 52first strand
Strand 2
C
7 12parallel
Strand 3
C
93 97parallel
Strand 4
C
270 276parallel
Strand 5
C
227 232parallel
Strand 6
C
119 123parallel
Strand 7
C
174 179parallel
Strand 8
C
196 199parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 52first strand
Strand 2
D
7 12parallel
Strand 3
D
93 97parallel
Strand 4
D
270 276parallel
Strand 5
D
227 232parallel
Strand 6
D
119 123parallel
Strand 7
D
174 177parallel
Strand 8
D
196 198parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
46 52first strand
Strand 2
E
7 12parallel
Strand 3
E
93 97parallel
Strand 4
E
270 276parallel
Strand 5
E
227 232parallel
Strand 6
E
119 123parallel
Strand 7
E
174 179parallel
Strand 8
E
196 199parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
46 52first strand
Strand 2
F
7 12parallel
Strand 3
F
93 97parallel
Strand 4
F
270 276parallel
Strand 5
F
227 232parallel
Strand 6
F
119 123parallel
Strand 7
F
174 179parallel
Strand 8
F
196 199parallel
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