Analysis of interatomic Contacts of Structural Units in PDB entry:
8E5W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8E5W entry

There is 1 chain in PDB entry 8E5W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 44CYS 520
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8E5W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
114 126Right-handed alpha
Helix 2
AA2
A
127 133Right-handed alpha
Helix 3
AA3
A
155 164Right-handed alpha
Helix 4
AA4
A
171 193Right-handed alpha
Helix 5
AA5
A
194 200Right-handed alpha
Helix 6
AA6
A
202 217Right-handed alpha
Helix 7
AA7
A
229 241Right-handed alpha
Helix 8
AA8
A
259 284Right-handed alpha
Helix 9
AA9
A
293 295Right-handed 310
Helix 10
AB1
A
296 306Right-handed alpha
Helix 11
AB2
A
307 309Right-handed 310
Helix 12
AB3
A
329 341Right-handed alpha
Helix 13
AB4
A
342 345Right-handed 310
Helix 14
AB5
A
346 359Right-handed alpha
Helix 15
AB6
A
362 374Right-handed alpha
Helix 16
AB7
A
383 395Right-handed alpha
Helix 17
AB8
A
401 416Right-handed alpha
Helix 18
AB9
A
417 420Right-handed 310
Helix 19
AC1
A
431 436Right-handed 310
Helix 20
AC2
A
467 479Right-handed alpha
Helix 21
AC3
A
497 511Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8E5W.

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
69 76anti-parallel
Strand 3
A
86 94anti-parallel
Strand 4
A
134 139anti-parallel
Strand 5
A
102 107parallel
Strand 6
A
222 227parallel
Strand 7
A
245 251parallel
Strand 8
A
456 460parallel
Strand 9
A
481 485parallel
Strand 10
A
519 520parallel
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